Gene : Glyma.07G045100 G. max Wm82.a2.v1
Defline:  (1 of 26) PF01388 - ARID/BRIGHT DNA binding domain (ARID) Genomic Order:  451
Name:  ? Glyma.07G045100 Secondary Identifier:  ? PAC:30492396
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G045100 0.5kb upstream 0.5kb upstream 13627 true Chr07: 3758539-3772165 Glycine max
Glyma.07G045100 0.5kb upstream 0.5kb upstream 500 false Chr07: 3758539-3759038 Glycine max
Glyma.07G045100 0.5kb downstream 0.5kb downstream 13627 true Chr07: 3759039-3772665 Glycine max
Glyma.07G045100 0.5kb downstream 0.5kb downstream 500 false Chr07: 3772166-3772665 Glycine max
Glyma.07G045100 1.0kb upstream 1.0kb upstream 14127 true Chr07: 3758039-3772165 Glycine max
Glyma.07G045100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3758039-3759038 Glycine max
Glyma.07G045100 1.0kb downstream 1.0kb downstream 14127 true Chr07: 3759039-3773165 Glycine max
Glyma.07G045100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3772166-3773165 Glycine max
Glyma.07G045100 2.0kb upstream 2.0kb upstream 15127 true Chr07: 3757039-3772165 Glycine max
Glyma.07G045100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3757039-3759038 Glycine max
Glyma.07G045100 2.0kb downstream 2.0kb downstream 15127 true Chr07: 3759039-3774165 Glycine max
Glyma.07G045100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3772166-3774165 Glycine max
Glyma.07G045100 5.0kb upstream 5.0kb upstream 18127 true Chr07: 3754039-3772165 Glycine max
Glyma.07G045100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3754039-3759038 Glycine max
Glyma.07G045100 5.0kb downstream 5.0kb downstream 18127 true Chr07: 3759039-3777165 Glycine max
Glyma.07G045100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3772166-3777165 Glycine max
Glyma.07G045100 10.0kb upstream 10.0kb upstream 23127 true Chr07: 3749039-3772165 Glycine max
Glyma.07G045100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3749039-3759038 Glycine max
Glyma.07G045100 10.0kb downstream 10.0kb downstream 23127 true Chr07: 3759039-3782165 Glycine max
Glyma.07G045100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3772166-3782165 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305200 5265 Fabidae View MSA
124071086 5270 Rosid View MSA
123740684 5271 Pentapetalae View MSA
122786718 5272 Eudicot View MSA
122047825 5273 Angiosperm View MSA
123428877 5275 Viridiplantae View MSA
121349653 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.22067 0.0 19.6997    
cufflinks 7.64639 0.0 20.7753    
cufflinks 9.13683 0.0 24.5733   High
cufflinks 8.00624 0.0 21.6842    
cufflinks 6.69555 0.0 18.352    
cufflinks 4.91398 0.0 13.8424   Low
cufflinks 6.03093 0.0 16.6802    
cufflinks 6.3805 0.0 17.537    
cufflinks 6.35768 0.0 17.4894    
cufflinks 1.43        
cufflinks 0.847       Low
cufflinks 2.106        
cufflinks 1.647        
cufflinks 1.703        
cufflinks 0.75       Low
cufflinks 2.259        
cufflinks 1.466        
cufflinks 1.97        
cufflinks 2.162        
cufflinks 2.15        
cufflinks 1.173        
cufflinks 2.298        
cufflinks 2.527       High
cufflinks 1.133        
cufflinks 2.011        
cufflinks 1.351        

0 Strain