Gene : Glyma.07G045900 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.6.1.2 - Alanine transaminase / Glutamic--pyruvic transaminase Genomic Order:  459
Name:  ? Glyma.07G045900 Secondary Identifier:  ? PAC:30492494
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ALANINE-DEG3-PWY Glycine max pathologic  
Gmax ALANINE-SYN2-PWY Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G045900 0.5kb upstream 0.5kb upstream 6491 true Chr07: 3827387-3833877 Glycine max
Glyma.07G045900 0.5kb upstream 0.5kb upstream 500 false Chr07: 3833378-3833877 Glycine max
Glyma.07G045900 0.5kb downstream 0.5kb downstream 6491 true Chr07: 3826887-3833377 Glycine max
Glyma.07G045900 0.5kb downstream 0.5kb downstream 500 false Chr07: 3826887-3827386 Glycine max
Glyma.07G045900 1.0kb upstream 1.0kb upstream 6991 true Chr07: 3827387-3834377 Glycine max
Glyma.07G045900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3833378-3834377 Glycine max
Glyma.07G045900 1.0kb downstream 1.0kb downstream 6991 true Chr07: 3826387-3833377 Glycine max
Glyma.07G045900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3826387-3827386 Glycine max
Glyma.07G045900 2.0kb upstream 2.0kb upstream 7991 true Chr07: 3827387-3835377 Glycine max
Glyma.07G045900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3833378-3835377 Glycine max
Glyma.07G045900 2.0kb downstream 2.0kb downstream 7991 true Chr07: 3825387-3833377 Glycine max
Glyma.07G045900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3825387-3827386 Glycine max
Glyma.07G045900 5.0kb upstream 5.0kb upstream 10991 true Chr07: 3827387-3838377 Glycine max
Glyma.07G045900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3833378-3838377 Glycine max
Glyma.07G045900 5.0kb downstream 5.0kb downstream 10991 true Chr07: 3822387-3833377 Glycine max
Glyma.07G045900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3822387-3827386 Glycine max
Glyma.07G045900 10.0kb upstream 10.0kb upstream 15991 true Chr07: 3827387-3843377 Glycine max
Glyma.07G045900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3833378-3843377 Glycine max
Glyma.07G045900 10.0kb downstream 10.0kb downstream 15991 true Chr07: 3817387-3833377 Glycine max
Glyma.07G045900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3817387-3827386 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301805 5265 Fabidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.3195 0.0 46.2092    
cufflinks 16.0473 0.0 42.8167   Low
cufflinks 29.8782 0.0 81.2845 High  
cufflinks 28.7031 0.0 77.7927 High  
cufflinks 56.6248 0.0 163.995 High High
cufflinks 39.7191 0.0 110.381 High  
cufflinks 19.3965 0.0 51.8152    
cufflinks 16.8977 0.0 45.0819    
cufflinks 68.3126 0.0 203.3 High High
cufflinks 5.574        
cufflinks 78.65     High High
cufflinks 12.987     High  
cufflinks 17.435     High  
cufflinks 23.989     High  
cufflinks 114.535     High High
cufflinks 3.548       Low
cufflinks 21.635     High  
cufflinks 9.488     High  
cufflinks 7.384        
cufflinks 2.683       Low
cufflinks 126.377     High High
cufflinks 3.133       Low
cufflinks 3.721        
cufflinks 41.944     High  
cufflinks 2.753       Low
cufflinks 85.803     High High

0 Strain