Gene : Glyma.07G046100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12100 - SEC10 Genomic Order:  461
Name:  ? Glyma.07G046100 Secondary Identifier:  ? PAC:30491790
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G046100 0.5kb upstream 0.5kb upstream 12169 true Chr07: 3861630-3873798 Glycine max
Glyma.07G046100 0.5kb upstream 0.5kb upstream 500 false Chr07: 3873299-3873798 Glycine max
Glyma.07G046100 0.5kb downstream 0.5kb downstream 12169 true Chr07: 3861130-3873298 Glycine max
Glyma.07G046100 0.5kb downstream 0.5kb downstream 500 false Chr07: 3861130-3861629 Glycine max
Glyma.07G046100 1.0kb upstream 1.0kb upstream 12669 true Chr07: 3861630-3874298 Glycine max
Glyma.07G046100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3873299-3874298 Glycine max
Glyma.07G046100 1.0kb downstream 1.0kb downstream 12669 true Chr07: 3860630-3873298 Glycine max
Glyma.07G046100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3860630-3861629 Glycine max
Glyma.07G046100 2.0kb upstream 2.0kb upstream 13669 true Chr07: 3861630-3875298 Glycine max
Glyma.07G046100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3873299-3875298 Glycine max
Glyma.07G046100 2.0kb downstream 2.0kb downstream 13669 true Chr07: 3859630-3873298 Glycine max
Glyma.07G046100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3859630-3861629 Glycine max
Glyma.07G046100 5.0kb upstream 5.0kb upstream 16669 true Chr07: 3861630-3878298 Glycine max
Glyma.07G046100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3873299-3878298 Glycine max
Glyma.07G046100 5.0kb downstream 5.0kb downstream 16669 true Chr07: 3856630-3873298 Glycine max
Glyma.07G046100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3856630-3861629 Glycine max
Glyma.07G046100 10.0kb upstream 10.0kb upstream 21669 true Chr07: 3861630-3883298 Glycine max
Glyma.07G046100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3873299-3883298 Glycine max
Glyma.07G046100 10.0kb downstream 10.0kb downstream 21669 true Chr07: 3851630-3873298 Glycine max
Glyma.07G046100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3851630-3861629 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301193 5265 Fabidae View MSA
124068923 5270 Rosid View MSA
123739116 5271 Pentapetalae View MSA
122790579 5272 Eudicot View MSA
122042742 5273 Angiosperm View MSA
121350027 5274 Embryophyte View MSA
123428595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.42444 0.0 25.1463   Low
cufflinks 12.7304 0.0 34.1725    
cufflinks 10.7874 0.0 28.836   Low
cufflinks 13.1826 0.0 35.4395    
cufflinks 13.6914 0.0 36.8776    
cufflinks 14.3036 0.0 38.6157    
cufflinks 15.1695 0.0 41.039   High
cufflinks 15.3511 0.0 41.5862   High
cufflinks 12.7466 0.0 34.231    
cufflinks 5.013       High
cufflinks 3.212        
cufflinks 3.33        
cufflinks 5.078       High
cufflinks 4.722        
cufflinks 3.453        
cufflinks 3.357        
cufflinks 4.992       High
cufflinks 4.166        
cufflinks 4.545        
cufflinks 2.333       Low
cufflinks 3.353        
cufflinks 2.696       Low
cufflinks 3.106        
cufflinks 3.44        
cufflinks 2.466       Low
cufflinks 4.998       High

0 Strain