Gene : Glyma.07G047700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22734:SF3 - RIBOSOME PRODUCTION FACTOR 1 Genomic Order:  477
Name:  ? Glyma.07G047700 Secondary Identifier:  ? PAC:30494011
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G047700 0.5kb upstream 0.5kb upstream 4612 true Chr07: 3995001-3999612 Glycine max
Glyma.07G047700 0.5kb upstream 0.5kb upstream 500 false Chr07: 3995001-3995500 Glycine max
Glyma.07G047700 0.5kb downstream 0.5kb downstream 4612 true Chr07: 3995501-4000112 Glycine max
Glyma.07G047700 0.5kb downstream 0.5kb downstream 500 false Chr07: 3999613-4000112 Glycine max
Glyma.07G047700 1.0kb upstream 1.0kb upstream 5112 true Chr07: 3994501-3999612 Glycine max
Glyma.07G047700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3994501-3995500 Glycine max
Glyma.07G047700 1.0kb downstream 1.0kb downstream 5112 true Chr07: 3995501-4000612 Glycine max
Glyma.07G047700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3999613-4000612 Glycine max
Glyma.07G047700 2.0kb upstream 2.0kb upstream 6112 true Chr07: 3993501-3999612 Glycine max
Glyma.07G047700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3993501-3995500 Glycine max
Glyma.07G047700 2.0kb downstream 2.0kb downstream 6112 true Chr07: 3995501-4001612 Glycine max
Glyma.07G047700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3999613-4001612 Glycine max
Glyma.07G047700 5.0kb upstream 5.0kb upstream 9112 true Chr07: 3990501-3999612 Glycine max
Glyma.07G047700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3990501-3995500 Glycine max
Glyma.07G047700 5.0kb downstream 5.0kb downstream 9112 true Chr07: 3995501-4004612 Glycine max
Glyma.07G047700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3999613-4004612 Glycine max
Glyma.07G047700 10.0kb upstream 10.0kb upstream 14112 true Chr07: 3985501-3999612 Glycine max
Glyma.07G047700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3985501-3995500 Glycine max
Glyma.07G047700 10.0kb downstream 10.0kb downstream 14112 true Chr07: 3995501-4009612 Glycine max
Glyma.07G047700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3999613-4009612 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306203 5265 Fabidae View MSA
124063799 5270 Rosid View MSA
123738060 5271 Pentapetalae View MSA
122790896 5272 Eudicot View MSA
122041933 5273 Angiosperm View MSA
121347533 5274 Embryophyte View MSA
123426591 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9646 0.0 40.2288    
cufflinks 11.5228 0.0 35.4034    
cufflinks 4.80368 0.0 21.3832   Low
cufflinks 12.1296 0.0 36.9229    
cufflinks 12.7313 0.0 45.1685    
cufflinks 7.40905 0.0 24.4778    
cufflinks 11.3662 0.0 40.7787    
cufflinks 10.296 0.0 38.048    
cufflinks 10.787 0.0 33.5315    
cufflinks 2.178        
cufflinks 1.64       Low
cufflinks 2.019        
cufflinks 2.572        
cufflinks 3.67       High
cufflinks 1.955        
cufflinks 2.346        
cufflinks 1.975        
cufflinks 2.032        
cufflinks 2.604        
cufflinks 2.146        
cufflinks 2.424        
cufflinks 2.096        
cufflinks 2.78       High
cufflinks 1.607       Low
cufflinks 2.578        
cufflinks 2.37        

0 Strain