Gene : PhHAL.3G238500 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR11254//PTHR11254:SF345 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED Genomic Order:  2342
Name:  ? PhHAL.3G238500 Secondary Identifier:  ? PAC:40405966

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-7511 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.3G238500 0.5kb upstream 0.5kb upstream 9679 true Chr03: 14228255-14237933 Panicum hallii HAL
PhHAL.3G238500 0.5kb upstream 0.5kb upstream 500 false Chr03: 14228255-14228754 Panicum hallii HAL
PhHAL.3G238500 0.5kb downstream 0.5kb downstream 9679 true Chr03: 14228755-14238433 Panicum hallii HAL
PhHAL.3G238500 0.5kb downstream 0.5kb downstream 500 false Chr03: 14237934-14238433 Panicum hallii HAL
PhHAL.3G238500 1.0kb upstream 1.0kb upstream 10179 true Chr03: 14227755-14237933 Panicum hallii HAL
PhHAL.3G238500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 14227755-14228754 Panicum hallii HAL
PhHAL.3G238500 1.0kb downstream 1.0kb downstream 10179 true Chr03: 14228755-14238933 Panicum hallii HAL
PhHAL.3G238500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 14237934-14238933 Panicum hallii HAL
PhHAL.3G238500 2.0kb upstream 2.0kb upstream 11179 true Chr03: 14226755-14237933 Panicum hallii HAL
PhHAL.3G238500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 14226755-14228754 Panicum hallii HAL
PhHAL.3G238500 2.0kb downstream 2.0kb downstream 11179 true Chr03: 14228755-14239933 Panicum hallii HAL
PhHAL.3G238500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 14237934-14239933 Panicum hallii HAL
PhHAL.3G238500 5.0kb upstream 5.0kb upstream 14179 true Chr03: 14223755-14237933 Panicum hallii HAL
PhHAL.3G238500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 14223755-14228754 Panicum hallii HAL
PhHAL.3G238500 5.0kb downstream 5.0kb downstream 14179 true Chr03: 14228755-14242933 Panicum hallii HAL
PhHAL.3G238500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 14237934-14242933 Panicum hallii HAL
PhHAL.3G238500 10.0kb upstream 10.0kb upstream 19179 true Chr03: 14218755-14237933 Panicum hallii HAL
PhHAL.3G238500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 14218755-14228754 Panicum hallii HAL
PhHAL.3G238500 10.0kb downstream 10.0kb downstream 19179 true Chr03: 14228755-14247933 Panicum hallii HAL
PhHAL.3G238500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 14237934-14247933 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179694 5267 Panicoideae View MSA
124585478 5269 Grass View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier