Gene : PhHAL.3G279800 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR10906//PTHR10906:SF2 - SECY/SEC61-ALPHA FAMILY MEMBER // PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC Genomic Order:  2738
Name:  ? PhHAL.3G279800 Secondary Identifier:  ? PAC:40401835

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.3G279800 0.5kb upstream 0.5kb upstream 6909 true Chr03: 17480496-17487404 Panicum hallii HAL
PhHAL.3G279800 0.5kb upstream 0.5kb upstream 500 false Chr03: 17480496-17480995 Panicum hallii HAL
PhHAL.3G279800 0.5kb downstream 0.5kb downstream 6909 true Chr03: 17480996-17487904 Panicum hallii HAL
PhHAL.3G279800 0.5kb downstream 0.5kb downstream 500 false Chr03: 17487405-17487904 Panicum hallii HAL
PhHAL.3G279800 1.0kb upstream 1.0kb upstream 7409 true Chr03: 17479996-17487404 Panicum hallii HAL
PhHAL.3G279800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17479996-17480995 Panicum hallii HAL
PhHAL.3G279800 1.0kb downstream 1.0kb downstream 7409 true Chr03: 17480996-17488404 Panicum hallii HAL
PhHAL.3G279800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17487405-17488404 Panicum hallii HAL
PhHAL.3G279800 2.0kb upstream 2.0kb upstream 8409 true Chr03: 17478996-17487404 Panicum hallii HAL
PhHAL.3G279800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17478996-17480995 Panicum hallii HAL
PhHAL.3G279800 2.0kb downstream 2.0kb downstream 8409 true Chr03: 17480996-17489404 Panicum hallii HAL
PhHAL.3G279800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17487405-17489404 Panicum hallii HAL
PhHAL.3G279800 5.0kb upstream 5.0kb upstream 11409 true Chr03: 17475996-17487404 Panicum hallii HAL
PhHAL.3G279800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17475996-17480995 Panicum hallii HAL
PhHAL.3G279800 5.0kb downstream 5.0kb downstream 11409 true Chr03: 17480996-17492404 Panicum hallii HAL
PhHAL.3G279800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17487405-17492404 Panicum hallii HAL
PhHAL.3G279800 10.0kb upstream 10.0kb upstream 16409 true Chr03: 17470996-17487404 Panicum hallii HAL
PhHAL.3G279800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17470996-17480995 Panicum hallii HAL
PhHAL.3G279800 10.0kb downstream 10.0kb downstream 16409 true Chr03: 17480996-17497404 Panicum hallii HAL
PhHAL.3G279800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17487405-17497404 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185970 5267 Panicoideae View MSA
124577798 5269 Grass View MSA
122042778 5273 Angiosperm View MSA
121345832 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier