Gene : Glyma.07G038200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32467:SF5 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL1 Genomic Order:  382
Name:  ? Glyma.07G038200 Secondary Identifier:  ? PAC:30494273
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G038200 0.5kb upstream 0.5kb upstream 4539 true Chr07: 3140689-3145227 Glycine max
Glyma.07G038200 0.5kb upstream 0.5kb upstream 500 false Chr07: 3140689-3141188 Glycine max
Glyma.07G038200 0.5kb downstream 0.5kb downstream 4539 true Chr07: 3141189-3145727 Glycine max
Glyma.07G038200 0.5kb downstream 0.5kb downstream 500 false Chr07: 3145228-3145727 Glycine max
Glyma.07G038200 1.0kb upstream 1.0kb upstream 5039 true Chr07: 3140189-3145227 Glycine max
Glyma.07G038200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3140189-3141188 Glycine max
Glyma.07G038200 1.0kb downstream 1.0kb downstream 5039 true Chr07: 3141189-3146227 Glycine max
Glyma.07G038200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3145228-3146227 Glycine max
Glyma.07G038200 2.0kb upstream 2.0kb upstream 6039 true Chr07: 3139189-3145227 Glycine max
Glyma.07G038200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3139189-3141188 Glycine max
Glyma.07G038200 2.0kb downstream 2.0kb downstream 6039 true Chr07: 3141189-3147227 Glycine max
Glyma.07G038200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3145228-3147227 Glycine max
Glyma.07G038200 5.0kb upstream 5.0kb upstream 9039 true Chr07: 3136189-3145227 Glycine max
Glyma.07G038200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3136189-3141188 Glycine max
Glyma.07G038200 5.0kb downstream 5.0kb downstream 9039 true Chr07: 3141189-3150227 Glycine max
Glyma.07G038200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3145228-3150227 Glycine max
Glyma.07G038200 10.0kb upstream 10.0kb upstream 14039 true Chr07: 3131189-3145227 Glycine max
Glyma.07G038200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3131189-3141188 Glycine max
Glyma.07G038200 10.0kb downstream 10.0kb downstream 14039 true Chr07: 3141189-3155227 Glycine max
Glyma.07G038200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3145228-3155227 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041266 5273 Angiosperm View MSA
122304324 5265 Fabidae View MSA
124065940 5270 Rosid View MSA
123744753 5271 Pentapetalae View MSA
122796113 5272 Eudicot View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0306357 0.0 0.124804 Low Low
cufflinks 15.1378 0.0 40.5695   High
cufflinks 2.19947 0.0 6.65111    
cufflinks 3.04807 0.0 8.83444    
cufflinks 0.438612 0.0 1.59068    
cufflinks 1.11161 0.0 3.71257    
cufflinks 31.8355 0.0 90.1632 High High
cufflinks 0.482955 0.0 1.73669    
cufflinks 0.0162347 0.0 0.0688735 Low Low
cufflinks 0.158        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.774       High
cufflinks 0.04     Low  
cufflinks 0.097        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.34        
cufflinks 0.019     Low  
cufflinks 2.388       High
cufflinks 20.666     High High
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.173        
cufflinks 1.172        
cufflinks 0.004     Low Low
cufflinks 0.164        
cufflinks 0.014     Low Low

0 Strain