Gene : Glyma.07G039600 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.7.6.5//3.2.1.37//3.2.1.55 - GTP diphosphokinase / Stringent factor // Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  396
Name:  ? Glyma.07G039600 Secondary Identifier:  ? PAC:30492685
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G039600 0.5kb upstream 0.5kb upstream 5176 true Chr07: 3241770-3246945 Glycine max
Glyma.07G039600 0.5kb upstream 0.5kb upstream 500 false Chr07: 3246446-3246945 Glycine max
Glyma.07G039600 0.5kb downstream 0.5kb downstream 5176 true Chr07: 3241270-3246445 Glycine max
Glyma.07G039600 0.5kb downstream 0.5kb downstream 500 false Chr07: 3241270-3241769 Glycine max
Glyma.07G039600 1.0kb upstream 1.0kb upstream 5676 true Chr07: 3241770-3247445 Glycine max
Glyma.07G039600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3246446-3247445 Glycine max
Glyma.07G039600 1.0kb downstream 1.0kb downstream 5676 true Chr07: 3240770-3246445 Glycine max
Glyma.07G039600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3240770-3241769 Glycine max
Glyma.07G039600 2.0kb upstream 2.0kb upstream 6676 true Chr07: 3241770-3248445 Glycine max
Glyma.07G039600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3246446-3248445 Glycine max
Glyma.07G039600 2.0kb downstream 2.0kb downstream 6676 true Chr07: 3239770-3246445 Glycine max
Glyma.07G039600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3239770-3241769 Glycine max
Glyma.07G039600 5.0kb upstream 5.0kb upstream 9676 true Chr07: 3241770-3251445 Glycine max
Glyma.07G039600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3246446-3251445 Glycine max
Glyma.07G039600 5.0kb downstream 5.0kb downstream 9676 true Chr07: 3236770-3246445 Glycine max
Glyma.07G039600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3236770-3241769 Glycine max
Glyma.07G039600 10.0kb upstream 10.0kb upstream 14676 true Chr07: 3241770-3256445 Glycine max
Glyma.07G039600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3246446-3256445 Glycine max
Glyma.07G039600 10.0kb downstream 10.0kb downstream 14676 true Chr07: 3231770-3246445 Glycine max
Glyma.07G039600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3231770-3241769 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306941 5265 Fabidae View MSA
124067255 5270 Rosid View MSA
123738848 5271 Pentapetalae View MSA
122789814 5272 Eudicot View MSA
122044078 5273 Angiosperm View MSA
121346145 5274 Embryophyte View MSA
123428478 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.6377 0.0 236.826 High High
cufflinks 9.97988 0.0 26.6258    
cufflinks 67.587 0.0 221.243 High High
cufflinks 10.8965 0.0 29.088    
cufflinks 12.1601 0.0 32.5283    
cufflinks 28.043 0.0 79.7051 High  
cufflinks 10.4453 0.0 27.874    
cufflinks 15.9446 0.0 43.0965    
cufflinks 14.1739 0.0 38.1097    
cufflinks 8.544     High  
cufflinks 72.736     High High
cufflinks 30.874     High  
cufflinks 7.108       Low
cufflinks 5.094       Low
cufflinks 49.427     High High
cufflinks 11.927     High  
cufflinks 21.923     High  
cufflinks 8.794     High  
cufflinks 9.602     High  
cufflinks 14.562     High  
cufflinks 70.802     High High
cufflinks 15.023     High  
cufflinks 10.472     High  
cufflinks 57.827     High High
cufflinks 13.649     High  
cufflinks 49.478     High High

0 Strain