Gene : Glyma.07G040600 G. max Wm82.a2.v1
Defline:  (1 of 3) PF13768 - von Willebrand factor type A domain (VWA_3) Genomic Order:  406
Name:  ? Glyma.07G040600 Secondary Identifier:  ? PAC:30494860
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G040600 0.5kb upstream 0.5kb upstream 10329 true Chr07: 3368793-3379121 Glycine max
Glyma.07G040600 0.5kb upstream 0.5kb upstream 500 false Chr07: 3368793-3369292 Glycine max
Glyma.07G040600 0.5kb downstream 0.5kb downstream 10329 true Chr07: 3369293-3379621 Glycine max
Glyma.07G040600 0.5kb downstream 0.5kb downstream 500 false Chr07: 3379122-3379621 Glycine max
Glyma.07G040600 1.0kb upstream 1.0kb upstream 10829 true Chr07: 3368293-3379121 Glycine max
Glyma.07G040600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3368293-3369292 Glycine max
Glyma.07G040600 1.0kb downstream 1.0kb downstream 10829 true Chr07: 3369293-3380121 Glycine max
Glyma.07G040600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3379122-3380121 Glycine max
Glyma.07G040600 2.0kb upstream 2.0kb upstream 11829 true Chr07: 3367293-3379121 Glycine max
Glyma.07G040600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3367293-3369292 Glycine max
Glyma.07G040600 2.0kb downstream 2.0kb downstream 11829 true Chr07: 3369293-3381121 Glycine max
Glyma.07G040600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3379122-3381121 Glycine max
Glyma.07G040600 5.0kb upstream 5.0kb upstream 14829 true Chr07: 3364293-3379121 Glycine max
Glyma.07G040600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3364293-3369292 Glycine max
Glyma.07G040600 5.0kb downstream 5.0kb downstream 14829 true Chr07: 3369293-3384121 Glycine max
Glyma.07G040600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3379122-3384121 Glycine max
Glyma.07G040600 10.0kb upstream 10.0kb upstream 19829 true Chr07: 3359293-3379121 Glycine max
Glyma.07G040600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3359293-3369292 Glycine max
Glyma.07G040600 10.0kb downstream 10.0kb downstream 19829 true Chr07: 3369293-3389121 Glycine max
Glyma.07G040600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3379122-3389121 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307744 5265 Fabidae View MSA
124075817 5270 Rosid View MSA
123752935 5271 Pentapetalae View MSA
122774870 5272 Eudicot View MSA
122047960 5273 Angiosperm View MSA
121346159 5274 Embryophyte View MSA
123426285 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1051 0.0 59.9344    
cufflinks 8.18 0.0 29.1997    
cufflinks 26.3909 0.0 98.2676 High High
cufflinks 10.6607 0.0 37.155    
cufflinks 5.89142 0.0 22.0311   Low
cufflinks 13.3097 0.0 46.0216    
cufflinks 10.3234 0.0 30.8373    
cufflinks 24.0883 0.0 88.5444 High High
cufflinks 5.02161 0.0 19.2547   Low
cufflinks 1.732        
cufflinks 0.333       Low
cufflinks 3.0       High
cufflinks 0.74        
cufflinks 0.202       Low
cufflinks 0.326       Low
cufflinks 1.618        
cufflinks 0.658        
cufflinks 1.996        
cufflinks 2.1        
cufflinks 2.492       High
cufflinks 0.398       Low
cufflinks 2.061        
cufflinks 1.632        
cufflinks 0.413        
cufflinks 2.037        
cufflinks 0.507        

0 Strain