Gene : Glyma.07G028800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  288
Name:  ? Glyma.07G028800 Secondary Identifier:  ? PAC:30495163
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G028800 0.5kb upstream 0.5kb upstream 11351 true Chr07: 2315026-2326376 Glycine max
Glyma.07G028800 0.5kb upstream 0.5kb upstream 500 false Chr07: 2325877-2326376 Glycine max
Glyma.07G028800 0.5kb downstream 0.5kb downstream 11351 true Chr07: 2314526-2325876 Glycine max
Glyma.07G028800 0.5kb downstream 0.5kb downstream 500 false Chr07: 2314526-2315025 Glycine max
Glyma.07G028800 1.0kb upstream 1.0kb upstream 11851 true Chr07: 2315026-2326876 Glycine max
Glyma.07G028800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2325877-2326876 Glycine max
Glyma.07G028800 1.0kb downstream 1.0kb downstream 11851 true Chr07: 2314026-2325876 Glycine max
Glyma.07G028800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2314026-2315025 Glycine max
Glyma.07G028800 2.0kb upstream 2.0kb upstream 12851 true Chr07: 2315026-2327876 Glycine max
Glyma.07G028800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2325877-2327876 Glycine max
Glyma.07G028800 2.0kb downstream 2.0kb downstream 12851 true Chr07: 2313026-2325876 Glycine max
Glyma.07G028800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2313026-2315025 Glycine max
Glyma.07G028800 5.0kb upstream 5.0kb upstream 15851 true Chr07: 2315026-2330876 Glycine max
Glyma.07G028800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2325877-2330876 Glycine max
Glyma.07G028800 5.0kb downstream 5.0kb downstream 15851 true Chr07: 2310026-2325876 Glycine max
Glyma.07G028800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2310026-2315025 Glycine max
Glyma.07G028800 10.0kb upstream 10.0kb upstream 20851 true Chr07: 2315026-2335876 Glycine max
Glyma.07G028800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2325877-2335876 Glycine max
Glyma.07G028800 10.0kb downstream 10.0kb downstream 20851 true Chr07: 2305026-2325876 Glycine max
Glyma.07G028800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2305026-2315025 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300321 5265 Fabidae View MSA
124073724 5270 Rosid View MSA
123753708 5271 Pentapetalae View MSA
122789807 5272 Eudicot View MSA
122044017 5273 Angiosperm View MSA
121347327 5274 Embryophyte View MSA
123427490 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5018 0.0 62.4734   High
cufflinks 21.0498 0.0 94.2049 High High
cufflinks 3.16392 0.0 11.0403   Low
cufflinks 5.89824 0.0 20.3491    
cufflinks 4.52742 0.0 17.2019    
cufflinks 2.76576 0.0 9.82463   Low
cufflinks 7.68627 0.0 27.1134    
cufflinks 10.835 0.0 39.9914    
cufflinks 3.94422 0.0 13.542    
cufflinks 3.253        
cufflinks 0.027     Low Low
cufflinks 1.114        
cufflinks 0.241        
cufflinks 0.202        
cufflinks 0.382        
cufflinks 7.02       High
cufflinks 0.131        
cufflinks 2.148        
cufflinks 4.624        
cufflinks 8.957     High High
cufflinks 0.04     Low Low
cufflinks 8.86     High High
cufflinks 6.264        
cufflinks 0.099       Low
cufflinks 8.578     High High
cufflinks 0.088       Low

0 Strain