Gene : Glyma.07G029200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11564:SF5 - SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN Genomic Order:  292
Name:  ? Glyma.07G029200 Secondary Identifier:  ? PAC:30491865
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G029200 0.5kb upstream 0.5kb upstream 3830 true Chr07: 2344794-2348623 Glycine max
Glyma.07G029200 0.5kb upstream 0.5kb upstream 500 false Chr07: 2344794-2345293 Glycine max
Glyma.07G029200 0.5kb downstream 0.5kb downstream 3830 true Chr07: 2345294-2349123 Glycine max
Glyma.07G029200 0.5kb downstream 0.5kb downstream 500 false Chr07: 2348624-2349123 Glycine max
Glyma.07G029200 1.0kb upstream 1.0kb upstream 4330 true Chr07: 2344294-2348623 Glycine max
Glyma.07G029200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2344294-2345293 Glycine max
Glyma.07G029200 1.0kb downstream 1.0kb downstream 4330 true Chr07: 2345294-2349623 Glycine max
Glyma.07G029200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2348624-2349623 Glycine max
Glyma.07G029200 2.0kb upstream 2.0kb upstream 5330 true Chr07: 2343294-2348623 Glycine max
Glyma.07G029200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2343294-2345293 Glycine max
Glyma.07G029200 2.0kb downstream 2.0kb downstream 5330 true Chr07: 2345294-2350623 Glycine max
Glyma.07G029200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2348624-2350623 Glycine max
Glyma.07G029200 5.0kb upstream 5.0kb upstream 8330 true Chr07: 2340294-2348623 Glycine max
Glyma.07G029200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2340294-2345293 Glycine max
Glyma.07G029200 5.0kb downstream 5.0kb downstream 8330 true Chr07: 2345294-2353623 Glycine max
Glyma.07G029200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2348624-2353623 Glycine max
Glyma.07G029200 10.0kb upstream 10.0kb upstream 13330 true Chr07: 2335294-2348623 Glycine max
Glyma.07G029200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2335294-2345293 Glycine max
Glyma.07G029200 10.0kb downstream 10.0kb downstream 13330 true Chr07: 2345294-2358623 Glycine max
Glyma.07G029200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2348624-2358623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308589 5265 Fabidae View MSA
124067958 5270 Rosid View MSA
123743632 5271 Pentapetalae View MSA
122786990 5272 Eudicot View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9828 0.0 45.3863    
cufflinks 8.55149 0.0 23.1087   Low
cufflinks 14.362 0.0 38.3168    
cufflinks 13.3376 0.0 35.5875    
cufflinks 12.6039 0.0 33.6447    
cufflinks 13.2085 0.0 35.2461    
cufflinks 20.4846 0.0 55.0285   High
cufflinks 16.1098 0.0 43.0234    
cufflinks 10.5066 0.0 28.1553    
cufflinks 8.152     High  
cufflinks 11.608     High  
cufflinks 8.769     High  
cufflinks 9.178     High  
cufflinks 10.359     High  
cufflinks 10.264     High  
cufflinks 7.83     High  
cufflinks 8.145     High  
cufflinks 8.2     High  
cufflinks 7.785     High  
cufflinks 7.241     High  
cufflinks 13.798     High High
cufflinks 7.875     High  
cufflinks 6.265       Low
cufflinks 14.563     High High
cufflinks 7.412     High  
cufflinks 14.14     High High

0 Strain