Gene : Glyma.07G029900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32429:SF9 - POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE PROTEIN Genomic Order:  299
Name:  ? Glyma.07G029900 Secondary Identifier:  ? PAC:30493687
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G029900 0.5kb upstream 0.5kb upstream 3826 true Chr07: 2383023-2386848 Glycine max
Glyma.07G029900 0.5kb upstream 0.5kb upstream 500 false Chr07: 2386349-2386848 Glycine max
Glyma.07G029900 0.5kb downstream 0.5kb downstream 3826 true Chr07: 2382523-2386348 Glycine max
Glyma.07G029900 0.5kb downstream 0.5kb downstream 500 false Chr07: 2382523-2383022 Glycine max
Glyma.07G029900 1.0kb upstream 1.0kb upstream 4326 true Chr07: 2383023-2387348 Glycine max
Glyma.07G029900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2386349-2387348 Glycine max
Glyma.07G029900 1.0kb downstream 1.0kb downstream 4326 true Chr07: 2382023-2386348 Glycine max
Glyma.07G029900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2382023-2383022 Glycine max
Glyma.07G029900 2.0kb upstream 2.0kb upstream 5326 true Chr07: 2383023-2388348 Glycine max
Glyma.07G029900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2386349-2388348 Glycine max
Glyma.07G029900 2.0kb downstream 2.0kb downstream 5326 true Chr07: 2381023-2386348 Glycine max
Glyma.07G029900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2381023-2383022 Glycine max
Glyma.07G029900 5.0kb upstream 5.0kb upstream 8326 true Chr07: 2383023-2391348 Glycine max
Glyma.07G029900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2386349-2391348 Glycine max
Glyma.07G029900 5.0kb downstream 5.0kb downstream 8326 true Chr07: 2378023-2386348 Glycine max
Glyma.07G029900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2378023-2383022 Glycine max
Glyma.07G029900 10.0kb upstream 10.0kb upstream 13326 true Chr07: 2383023-2396348 Glycine max
Glyma.07G029900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2386349-2396348 Glycine max
Glyma.07G029900 10.0kb downstream 10.0kb downstream 13326 true Chr07: 2373023-2386348 Glycine max
Glyma.07G029900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2373023-2383022 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308019 5265 Fabidae View MSA
124062176 5270 Rosid View MSA
123736610 5271 Pentapetalae View MSA
122792298 5272 Eudicot View MSA
122045902 5273 Angiosperm View MSA
121346329 5274 Embryophyte View MSA
123380368 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 146.487 0.0 454.074 High High
cufflinks 14.8484 0.0 40.3414    
cufflinks 96.7383 0.0 282.813 High High
cufflinks 10.9221 0.0 30.3399    
cufflinks 0.747055 0.0 2.76564   Low
cufflinks 0.628879 0.0 2.34661   Low
cufflinks 6.7932 0.0 19.9821    
cufflinks 14.9219 0.0 40.5348    
cufflinks 0.596404 0.0 2.23046   Low
cufflinks 1.491        
cufflinks 0.046     Low  
cufflinks 18.667     High High
cufflinks 0.005     Low Low
cufflinks 0.011     Low Low
cufflinks 0.005     Low Low
cufflinks 14.112     High  
cufflinks 0.014     Low Low
cufflinks 6.632        
cufflinks 1.506        
cufflinks 20.701     High High
cufflinks 0.013     Low Low
cufflinks 20.905     High High
cufflinks 12.426     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 19.784     High High
cufflinks 0.057     Low  

0 Strain