Gene : Glyma.07G077100 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0686 - COP9 signalosome, subunit CSN1 Genomic Order:  771
Name:  ? Glyma.07G077100 Secondary Identifier:  ? PAC:30495575
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G077100 0.5kb upstream 0.5kb upstream 6095 true Chr07: 7026416-7032510 Glycine max
Glyma.07G077100 0.5kb upstream 0.5kb upstream 500 false Chr07: 7032011-7032510 Glycine max
Glyma.07G077100 0.5kb downstream 0.5kb downstream 6095 true Chr07: 7025916-7032010 Glycine max
Glyma.07G077100 0.5kb downstream 0.5kb downstream 500 false Chr07: 7025916-7026415 Glycine max
Glyma.07G077100 1.0kb upstream 1.0kb upstream 6595 true Chr07: 7026416-7033010 Glycine max
Glyma.07G077100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7032011-7033010 Glycine max
Glyma.07G077100 1.0kb downstream 1.0kb downstream 6595 true Chr07: 7025416-7032010 Glycine max
Glyma.07G077100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7025416-7026415 Glycine max
Glyma.07G077100 2.0kb upstream 2.0kb upstream 7595 true Chr07: 7026416-7034010 Glycine max
Glyma.07G077100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7032011-7034010 Glycine max
Glyma.07G077100 2.0kb downstream 2.0kb downstream 7595 true Chr07: 7024416-7032010 Glycine max
Glyma.07G077100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7024416-7026415 Glycine max
Glyma.07G077100 5.0kb upstream 5.0kb upstream 10595 true Chr07: 7026416-7037010 Glycine max
Glyma.07G077100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7032011-7037010 Glycine max
Glyma.07G077100 5.0kb downstream 5.0kb downstream 10595 true Chr07: 7021416-7032010 Glycine max
Glyma.07G077100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7021416-7026415 Glycine max
Glyma.07G077100 10.0kb upstream 10.0kb upstream 15595 true Chr07: 7026416-7042010 Glycine max
Glyma.07G077100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7032011-7042010 Glycine max
Glyma.07G077100 10.0kb downstream 10.0kb downstream 15595 true Chr07: 7016416-7032010 Glycine max
Glyma.07G077100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7016416-7026415 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303259 5265 Fabidae View MSA
124062748 5270 Rosid View MSA
123740454 5271 Pentapetalae View MSA
122790295 5272 Eudicot View MSA
122047675 5273 Angiosperm View MSA
121344985 5274 Embryophyte View MSA
123424538 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8487 0.0 36.9832   Low
cufflinks 17.8532 0.0 47.6546    
cufflinks 15.0551 0.0 40.1753    
cufflinks 14.3034 0.0 38.1858    
cufflinks 17.2015 0.0 45.9126    
cufflinks 17.0951 0.0 45.6202    
cufflinks 13.8773 0.0 37.0652   Low
cufflinks 16.3227 0.0 43.5476    
cufflinks 18.7083 0.0 49.9745   High
cufflinks 4.861        
cufflinks 3.648       Low
cufflinks 4.41        
cufflinks 7.064       High
cufflinks 6.866     High High
cufflinks 4.682        
cufflinks 4.445        
cufflinks 2.997       Low
cufflinks 4.355        
cufflinks 5.541        
cufflinks 3.911        
cufflinks 4.652        
cufflinks 4.138        
cufflinks 4.576        
cufflinks 4.473        
cufflinks 3.945        
cufflinks 4.555        

0 Strain