Gene : Glyma.07G080100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14986 - RURM1 PROTEIN Genomic Order:  801
Name:  ? Glyma.07G080100 Secondary Identifier:  ? PAC:30493277
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G080100 0.5kb upstream 0.5kb upstream 4262 true Chr07: 7283167-7287428 Glycine max
Glyma.07G080100 0.5kb upstream 0.5kb upstream 500 false Chr07: 7286929-7287428 Glycine max
Glyma.07G080100 0.5kb downstream 0.5kb downstream 4262 true Chr07: 7282667-7286928 Glycine max
Glyma.07G080100 0.5kb downstream 0.5kb downstream 500 false Chr07: 7282667-7283166 Glycine max
Glyma.07G080100 1.0kb upstream 1.0kb upstream 4762 true Chr07: 7283167-7287928 Glycine max
Glyma.07G080100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7286929-7287928 Glycine max
Glyma.07G080100 1.0kb downstream 1.0kb downstream 4762 true Chr07: 7282167-7286928 Glycine max
Glyma.07G080100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7282167-7283166 Glycine max
Glyma.07G080100 2.0kb upstream 2.0kb upstream 5762 true Chr07: 7283167-7288928 Glycine max
Glyma.07G080100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7286929-7288928 Glycine max
Glyma.07G080100 2.0kb downstream 2.0kb downstream 5762 true Chr07: 7281167-7286928 Glycine max
Glyma.07G080100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7281167-7283166 Glycine max
Glyma.07G080100 5.0kb upstream 5.0kb upstream 8762 true Chr07: 7283167-7291928 Glycine max
Glyma.07G080100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7286929-7291928 Glycine max
Glyma.07G080100 5.0kb downstream 5.0kb downstream 8762 true Chr07: 7278167-7286928 Glycine max
Glyma.07G080100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7278167-7283166 Glycine max
Glyma.07G080100 10.0kb upstream 10.0kb upstream 13762 true Chr07: 7283167-7296928 Glycine max
Glyma.07G080100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7286929-7296928 Glycine max
Glyma.07G080100 10.0kb downstream 10.0kb downstream 13762 true Chr07: 7273167-7286928 Glycine max
Glyma.07G080100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7273167-7283166 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300531 5265 Fabidae View MSA
124062744 5270 Rosid View MSA
123740822 5271 Pentapetalae View MSA
122787578 5272 Eudicot View MSA
122042702 5273 Angiosperm View MSA
121349915 5274 Embryophyte View MSA
123424285 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.3719 0.0 92.8293 High  
cufflinks 30.1525 0.0 81.9357 High  
cufflinks 29.1725 0.0 79.1195 High  
cufflinks 27.6825 0.0 75.5634 High Low
cufflinks 39.3277 0.0 105.606 High  
cufflinks 48.8808 0.0 130.516 High High
cufflinks 30.0087 0.0 81.7392 High  
cufflinks 36.2758 0.0 97.5893 High  
cufflinks 43.7152 0.0 116.927 High High
cufflinks 6.677        
cufflinks 7.888     High  
cufflinks 7.802     High  
cufflinks 9.108     High High
cufflinks 11.242     High High
cufflinks 6.133     High  
cufflinks 5.199        
cufflinks 6.356     High  
cufflinks 9.573     High High
cufflinks 6.02        
cufflinks 4.114       Low
cufflinks 7.866     High  
cufflinks 5.319        
cufflinks 4.741       Low
cufflinks 8.767     High  
cufflinks 4.965       Low
cufflinks 7.251     High  

0 Strain