Gene : Glyma.07G082200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12271:SF58 - EXPRESSED PROTEIN Genomic Order:  822
Name:  ? Glyma.07G082200 Secondary Identifier:  ? PAC:30495022
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G082200 0.5kb upstream 0.5kb upstream 5928 true Chr07: 7549036-7554963 Glycine max
Glyma.07G082200 0.5kb upstream 0.5kb upstream 500 false Chr07: 7554464-7554963 Glycine max
Glyma.07G082200 0.5kb downstream 0.5kb downstream 5928 true Chr07: 7548536-7554463 Glycine max
Glyma.07G082200 0.5kb downstream 0.5kb downstream 500 false Chr07: 7548536-7549035 Glycine max
Glyma.07G082200 1.0kb upstream 1.0kb upstream 6428 true Chr07: 7549036-7555463 Glycine max
Glyma.07G082200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7554464-7555463 Glycine max
Glyma.07G082200 1.0kb downstream 1.0kb downstream 6428 true Chr07: 7548036-7554463 Glycine max
Glyma.07G082200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7548036-7549035 Glycine max
Glyma.07G082200 2.0kb upstream 2.0kb upstream 7428 true Chr07: 7549036-7556463 Glycine max
Glyma.07G082200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7554464-7556463 Glycine max
Glyma.07G082200 2.0kb downstream 2.0kb downstream 7428 true Chr07: 7547036-7554463 Glycine max
Glyma.07G082200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7547036-7549035 Glycine max
Glyma.07G082200 5.0kb upstream 5.0kb upstream 10428 true Chr07: 7549036-7559463 Glycine max
Glyma.07G082200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7554464-7559463 Glycine max
Glyma.07G082200 5.0kb downstream 5.0kb downstream 10428 true Chr07: 7544036-7554463 Glycine max
Glyma.07G082200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7544036-7549035 Glycine max
Glyma.07G082200 10.0kb upstream 10.0kb upstream 15428 true Chr07: 7549036-7564463 Glycine max
Glyma.07G082200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7554464-7564463 Glycine max
Glyma.07G082200 10.0kb downstream 10.0kb downstream 15428 true Chr07: 7539036-7554463 Glycine max
Glyma.07G082200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7539036-7549035 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308232 5265 Fabidae View MSA
124067055 5270 Rosid View MSA
123752955 5271 Pentapetalae View MSA
122796167 5272 Eudicot View MSA
122048124 5273 Angiosperm View MSA
121349323 5274 Embryophyte View MSA
123428586 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6131 0.0 47.1158    
cufflinks 12.1703 0.0 46.0108    
cufflinks 23.3496 0.0 110.006 High High
cufflinks 16.9218 0.0 64.7856    
cufflinks 13.9536 0.0 52.3672    
cufflinks 8.23927 0.0 36.4596   Low
cufflinks 23.9946 0.0 97.0398 High High
cufflinks 12.0068 0.0 45.1614    
cufflinks 17.2692 0.0 65.6987    
cufflinks 2.17       Low
cufflinks 7.587     High High
cufflinks 4.338        
cufflinks 2.359        
cufflinks 2.391        
cufflinks 6.143     High High
cufflinks 3.642        
cufflinks 1.379       Low
cufflinks 2.892        
cufflinks 3.962        
cufflinks 4.061        
cufflinks 6.169     High High
cufflinks 3.968        
cufflinks 2.414        
cufflinks 7.701     High High
cufflinks 4.03        
cufflinks 2.997        

0 Strain