Gene : Glyma.07G082800 G. max Wm82.a2.v1
Defline:  (1 of 8) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Genomic Order:  828
Name:  ? Glyma.07G082800 Secondary Identifier:  ? PAC:30493442
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax COA-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G082800 0.5kb upstream 0.5kb upstream 4332 true Chr07: 7609774-7614105 Glycine max
Glyma.07G082800 0.5kb upstream 0.5kb upstream 500 false Chr07: 7613606-7614105 Glycine max
Glyma.07G082800 0.5kb downstream 0.5kb downstream 4332 true Chr07: 7609274-7613605 Glycine max
Glyma.07G082800 0.5kb downstream 0.5kb downstream 500 false Chr07: 7609274-7609773 Glycine max
Glyma.07G082800 1.0kb upstream 1.0kb upstream 4832 true Chr07: 7609774-7614605 Glycine max
Glyma.07G082800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7613606-7614605 Glycine max
Glyma.07G082800 1.0kb downstream 1.0kb downstream 4832 true Chr07: 7608774-7613605 Glycine max
Glyma.07G082800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7608774-7609773 Glycine max
Glyma.07G082800 2.0kb upstream 2.0kb upstream 5832 true Chr07: 7609774-7615605 Glycine max
Glyma.07G082800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7613606-7615605 Glycine max
Glyma.07G082800 2.0kb downstream 2.0kb downstream 5832 true Chr07: 7607774-7613605 Glycine max
Glyma.07G082800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7607774-7609773 Glycine max
Glyma.07G082800 5.0kb upstream 5.0kb upstream 8832 true Chr07: 7609774-7618605 Glycine max
Glyma.07G082800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7613606-7618605 Glycine max
Glyma.07G082800 5.0kb downstream 5.0kb downstream 8832 true Chr07: 7604774-7613605 Glycine max
Glyma.07G082800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7604774-7609773 Glycine max
Glyma.07G082800 10.0kb upstream 10.0kb upstream 13832 true Chr07: 7609774-7623605 Glycine max
Glyma.07G082800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7613606-7623605 Glycine max
Glyma.07G082800 10.0kb downstream 10.0kb downstream 13832 true Chr07: 7599774-7613605 Glycine max
Glyma.07G082800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7599774-7609773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310466 5265 Fabidae View MSA
124065086 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.93883 0.0 39.5391   Low
cufflinks 9.75071 0.0 42.1603    
cufflinks 7.1446 0.0 34.0928   Low
cufflinks 8.57073 0.0 46.79    
cufflinks 14.5523 0.0 64.7343   High
cufflinks 11.0616 0.0 49.1127    
cufflinks 11.1642 0.0 50.3906    
cufflinks 8.0839 0.0 40.0181    
cufflinks 11.6769 0.0 50.4007    
cufflinks 0.314        
cufflinks 0.264        
cufflinks 0.492        
cufflinks 0.685       High
cufflinks 1.055       High
cufflinks 0.272        
cufflinks 0.355        
cufflinks 0.203       Low
cufflinks 0.593       High
cufflinks 0.556        
cufflinks 0.32        
cufflinks 0.214       Low
cufflinks 0.359        
cufflinks 0.432        
cufflinks 0.315        
cufflinks 0.366        
cufflinks 0.272        

0 Strain