Gene : Glyma.07G071800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11079:SF10 - RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBD Genomic Order:  718
Name:  ? Glyma.07G071800 Secondary Identifier:  ? PAC:30493431
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax RIBOSYN2-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G071800 0.5kb upstream 0.5kb upstream 3955 true Chr07: 6522753-6526707 Glycine max
Glyma.07G071800 0.5kb upstream 0.5kb upstream 500 false Chr07: 6522753-6523252 Glycine max
Glyma.07G071800 0.5kb downstream 0.5kb downstream 3955 true Chr07: 6523253-6527207 Glycine max
Glyma.07G071800 0.5kb downstream 0.5kb downstream 500 false Chr07: 6526708-6527207 Glycine max
Glyma.07G071800 1.0kb upstream 1.0kb upstream 4455 true Chr07: 6522253-6526707 Glycine max
Glyma.07G071800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6522253-6523252 Glycine max
Glyma.07G071800 1.0kb downstream 1.0kb downstream 4455 true Chr07: 6523253-6527707 Glycine max
Glyma.07G071800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6526708-6527707 Glycine max
Glyma.07G071800 2.0kb upstream 2.0kb upstream 5455 true Chr07: 6521253-6526707 Glycine max
Glyma.07G071800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6521253-6523252 Glycine max
Glyma.07G071800 2.0kb downstream 2.0kb downstream 5455 true Chr07: 6523253-6528707 Glycine max
Glyma.07G071800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6526708-6528707 Glycine max
Glyma.07G071800 5.0kb upstream 5.0kb upstream 8455 true Chr07: 6518253-6526707 Glycine max
Glyma.07G071800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6518253-6523252 Glycine max
Glyma.07G071800 5.0kb downstream 5.0kb downstream 8455 true Chr07: 6523253-6531707 Glycine max
Glyma.07G071800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6526708-6531707 Glycine max
Glyma.07G071800 10.0kb upstream 10.0kb upstream 13455 true Chr07: 6513253-6526707 Glycine max
Glyma.07G071800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6513253-6523252 Glycine max
Glyma.07G071800 10.0kb downstream 10.0kb downstream 13455 true Chr07: 6523253-6536707 Glycine max
Glyma.07G071800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6526708-6536707 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304868 5265 Fabidae View MSA
124065963 5270 Rosid View MSA
123740578 5271 Pentapetalae View MSA
122787419 5272 Eudicot View MSA
122047266 5273 Angiosperm View MSA
121347382 5274 Embryophyte View MSA
123428398 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.54502 0.0 4.97382    
cufflinks 2.88782 0.0 8.49344   High
cufflinks 0.977093 0.0 3.31884   Low
cufflinks 1.88958 0.0 5.89962    
cufflinks 2.36828 0.0 7.18689    
cufflinks 1.58278 0.0 5.06804    
cufflinks 2.47632 0.0 7.46629    
cufflinks 1.79042 0.0 5.63005    
cufflinks 2.44056 0.0 7.34631    
cufflinks 1.892        
cufflinks 0.096       Low
cufflinks 1.611        
cufflinks 1.653        
cufflinks 2.197        
cufflinks 0.447        
cufflinks 2.245        
cufflinks 0.437        
cufflinks 2.246        
cufflinks 3.038        
cufflinks 2.153        
cufflinks 0.151       Low
cufflinks 2.362        
cufflinks 3.496       High
cufflinks 0.199       Low
cufflinks 2.302        
cufflinks 0.281       Low

0 Strain