Gene : Glyma.07G060900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21668 - EIF-1A Genomic Order:  609
Name:  ? Glyma.07G060900 Secondary Identifier:  ? PAC:30494285
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G060900 0.5kb upstream 0.5kb upstream 1572 true Chr07: 5395165-5396736 Glycine max
Glyma.07G060900 0.5kb upstream 0.5kb upstream 500 false Chr07: 5396237-5396736 Glycine max
Glyma.07G060900 0.5kb downstream 0.5kb downstream 1572 true Chr07: 5394665-5396236 Glycine max
Glyma.07G060900 0.5kb downstream 0.5kb downstream 500 false Chr07: 5394665-5395164 Glycine max
Glyma.07G060900 1.0kb upstream 1.0kb upstream 2072 true Chr07: 5395165-5397236 Glycine max
Glyma.07G060900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5396237-5397236 Glycine max
Glyma.07G060900 1.0kb downstream 1.0kb downstream 2072 true Chr07: 5394165-5396236 Glycine max
Glyma.07G060900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5394165-5395164 Glycine max
Glyma.07G060900 2.0kb upstream 2.0kb upstream 3072 true Chr07: 5395165-5398236 Glycine max
Glyma.07G060900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5396237-5398236 Glycine max
Glyma.07G060900 2.0kb downstream 2.0kb downstream 3072 true Chr07: 5393165-5396236 Glycine max
Glyma.07G060900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5393165-5395164 Glycine max
Glyma.07G060900 5.0kb upstream 5.0kb upstream 6072 true Chr07: 5395165-5401236 Glycine max
Glyma.07G060900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5396237-5401236 Glycine max
Glyma.07G060900 5.0kb downstream 5.0kb downstream 6072 true Chr07: 5390165-5396236 Glycine max
Glyma.07G060900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5390165-5395164 Glycine max
Glyma.07G060900 10.0kb upstream 10.0kb upstream 11072 true Chr07: 5395165-5406236 Glycine max
Glyma.07G060900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5396237-5406236 Glycine max
Glyma.07G060900 10.0kb downstream 10.0kb downstream 11072 true Chr07: 5385165-5396236 Glycine max
Glyma.07G060900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5385165-5395164 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309063 5265 Fabidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.05 0.0 102.027 High  
cufflinks 19.7172 0.0 52.9999   Low
cufflinks 75.9585 0.0 212.22 High High
cufflinks 48.223 0.0 130.548 High  
cufflinks 33.9368 0.0 90.8053 High  
cufflinks 49.4739 0.0 134.269 High  
cufflinks 45.7943 0.0 123.923 High  
cufflinks 61.7897 0.0 170.154 High  
cufflinks 38.664 0.0 103.694 High  
cufflinks 32.977     High High
cufflinks 27.693     High  
cufflinks 47.909     High High
cufflinks 16.469     High  
cufflinks 14.059     High  
cufflinks 13.797     High  
cufflinks 11.353     High  
cufflinks 31.404     High  
cufflinks 33.299     High High
cufflinks 12.566     High  
cufflinks 6.701       Low
cufflinks 19.796     High  
cufflinks 9.039     High Low
cufflinks 7.895     High Low
cufflinks 26.939     High  
cufflinks 8.469     High Low
cufflinks 26.742     High  

0 Strain