Gene : PhHAL.4G249000 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR14894 - CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3 Genomic Order:  1796
Name:  ? PhHAL.4G249000 Secondary Identifier:  ? PAC:40423510

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.4G249000 0.5kb upstream 0.5kb upstream 7417 true Chr04: 41475808-41483224 Panicum hallii HAL
PhHAL.4G249000 0.5kb upstream 0.5kb upstream 500 false Chr04: 41482725-41483224 Panicum hallii HAL
PhHAL.4G249000 0.5kb downstream 0.5kb downstream 7417 true Chr04: 41475308-41482724 Panicum hallii HAL
PhHAL.4G249000 0.5kb downstream 0.5kb downstream 500 false Chr04: 41475308-41475807 Panicum hallii HAL
PhHAL.4G249000 1.0kb upstream 1.0kb upstream 7917 true Chr04: 41475808-41483724 Panicum hallii HAL
PhHAL.4G249000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 41482725-41483724 Panicum hallii HAL
PhHAL.4G249000 1.0kb downstream 1.0kb downstream 7917 true Chr04: 41474808-41482724 Panicum hallii HAL
PhHAL.4G249000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 41474808-41475807 Panicum hallii HAL
PhHAL.4G249000 2.0kb upstream 2.0kb upstream 8917 true Chr04: 41475808-41484724 Panicum hallii HAL
PhHAL.4G249000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 41482725-41484724 Panicum hallii HAL
PhHAL.4G249000 2.0kb downstream 2.0kb downstream 8917 true Chr04: 41473808-41482724 Panicum hallii HAL
PhHAL.4G249000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 41473808-41475807 Panicum hallii HAL
PhHAL.4G249000 5.0kb upstream 5.0kb upstream 11917 true Chr04: 41475808-41487724 Panicum hallii HAL
PhHAL.4G249000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 41482725-41487724 Panicum hallii HAL
PhHAL.4G249000 5.0kb downstream 5.0kb downstream 11917 true Chr04: 41470808-41482724 Panicum hallii HAL
PhHAL.4G249000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 41470808-41475807 Panicum hallii HAL
PhHAL.4G249000 10.0kb upstream 10.0kb upstream 16917 true Chr04: 41475808-41492724 Panicum hallii HAL
PhHAL.4G249000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 41482725-41492724 Panicum hallii HAL
PhHAL.4G249000 10.0kb downstream 10.0kb downstream 16917 true Chr04: 41465808-41482724 Panicum hallii HAL
PhHAL.4G249000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 41465808-41475807 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189320 5267 Panicoideae View MSA
124575645 5269 Grass View MSA
122046505 5273 Angiosperm View MSA
121347618 5274 Embryophyte View MSA
123424733 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier