Gene : Glyma.07G054800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31384:SF17 - AUXIN RESPONSE FACTOR 11-RELATED Genomic Order:  548
Name:  ? Glyma.07G054800 Secondary Identifier:  ? PAC:30494702
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G054800 0.5kb upstream 0.5kb upstream 5701 true Chr07: 4807176-4812876 Glycine max
Glyma.07G054800 0.5kb upstream 0.5kb upstream 500 false Chr07: 4812377-4812876 Glycine max
Glyma.07G054800 0.5kb downstream 0.5kb downstream 5701 true Chr07: 4806676-4812376 Glycine max
Glyma.07G054800 0.5kb downstream 0.5kb downstream 500 false Chr07: 4806676-4807175 Glycine max
Glyma.07G054800 1.0kb upstream 1.0kb upstream 6201 true Chr07: 4807176-4813376 Glycine max
Glyma.07G054800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4812377-4813376 Glycine max
Glyma.07G054800 1.0kb downstream 1.0kb downstream 6201 true Chr07: 4806176-4812376 Glycine max
Glyma.07G054800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4806176-4807175 Glycine max
Glyma.07G054800 2.0kb upstream 2.0kb upstream 7201 true Chr07: 4807176-4814376 Glycine max
Glyma.07G054800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4812377-4814376 Glycine max
Glyma.07G054800 2.0kb downstream 2.0kb downstream 7201 true Chr07: 4805176-4812376 Glycine max
Glyma.07G054800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4805176-4807175 Glycine max
Glyma.07G054800 5.0kb upstream 5.0kb upstream 10201 true Chr07: 4807176-4817376 Glycine max
Glyma.07G054800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4812377-4817376 Glycine max
Glyma.07G054800 5.0kb downstream 5.0kb downstream 10201 true Chr07: 4802176-4812376 Glycine max
Glyma.07G054800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4802176-4807175 Glycine max
Glyma.07G054800 10.0kb upstream 10.0kb upstream 15201 true Chr07: 4807176-4822376 Glycine max
Glyma.07G054800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4812377-4822376 Glycine max
Glyma.07G054800 10.0kb downstream 10.0kb downstream 15201 true Chr07: 4797176-4812376 Glycine max
Glyma.07G054800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4797176-4807175 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308659 5265 Fabidae View MSA
124070371 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.18869 0.0 11.2124   Low
cufflinks 32.7818 0.0 154.152 High High
cufflinks 3.26036 0.0 10.9499    
cufflinks 4.60316 0.0 16.7135    
cufflinks 6.51972 0.0 22.6924    
cufflinks 2.04835 0.0 7.86012   Low
cufflinks 3.73764 0.0 14.2673    
cufflinks 5.94543 0.0 20.8069    
cufflinks 6.79744 0.0 23.5731    
cufflinks 1.954        
cufflinks 0.073       Low
cufflinks 1.706        
cufflinks 1.819        
cufflinks 1.205        
cufflinks 0.08       Low
cufflinks 1.064        
cufflinks 0.498        
cufflinks 0.913        
cufflinks 7.439     High High
cufflinks 0.573        
cufflinks 0.138       Low
cufflinks 0.799        
cufflinks 2.143        
cufflinks 0.062       Low
cufflinks 0.805        
cufflinks 0.364        

0 Strain