Gene : Glyma.07G055200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11514:SF47 - TRANSCRIPTION FACTOR ABA-INDUCIBLE BHLH-TYPE-RELATED Genomic Order:  552
Name:  ? Glyma.07G055200 Secondary Identifier:  ? PAC:30492609
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G055200 0.5kb upstream 0.5kb upstream 3366 true Chr07: 4869485-4872850 Glycine max
Glyma.07G055200 0.5kb upstream 0.5kb upstream 500 false Chr07: 4869485-4869984 Glycine max
Glyma.07G055200 0.5kb downstream 0.5kb downstream 3366 true Chr07: 4869985-4873350 Glycine max
Glyma.07G055200 0.5kb downstream 0.5kb downstream 500 false Chr07: 4872851-4873350 Glycine max
Glyma.07G055200 1.0kb upstream 1.0kb upstream 3866 true Chr07: 4868985-4872850 Glycine max
Glyma.07G055200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4868985-4869984 Glycine max
Glyma.07G055200 1.0kb downstream 1.0kb downstream 3866 true Chr07: 4869985-4873850 Glycine max
Glyma.07G055200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4872851-4873850 Glycine max
Glyma.07G055200 2.0kb upstream 2.0kb upstream 4866 true Chr07: 4867985-4872850 Glycine max
Glyma.07G055200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4867985-4869984 Glycine max
Glyma.07G055200 2.0kb downstream 2.0kb downstream 4866 true Chr07: 4869985-4874850 Glycine max
Glyma.07G055200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4872851-4874850 Glycine max
Glyma.07G055200 5.0kb upstream 5.0kb upstream 7866 true Chr07: 4864985-4872850 Glycine max
Glyma.07G055200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4864985-4869984 Glycine max
Glyma.07G055200 5.0kb downstream 5.0kb downstream 7866 true Chr07: 4869985-4877850 Glycine max
Glyma.07G055200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4872851-4877850 Glycine max
Glyma.07G055200 10.0kb upstream 10.0kb upstream 12866 true Chr07: 4859985-4872850 Glycine max
Glyma.07G055200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4859985-4869984 Glycine max
Glyma.07G055200 10.0kb downstream 10.0kb downstream 12866 true Chr07: 4869985-4882850 Glycine max
Glyma.07G055200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4872851-4882850 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300490 5265 Fabidae View MSA
124067031 5270 Rosid View MSA
123743665 5271 Pentapetalae View MSA
122788988 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.44659 0.0 22.5537    
cufflinks 5.32153 0.0 14.4681    
cufflinks 10.346 0.0 27.6094   High
cufflinks 8.47055 0.0 22.6197    
cufflinks 5.89372 0.0 15.9162    
cufflinks 2.8496 0.0 8.18462   Low
cufflinks 4.45697 0.0 12.2466    
cufflinks 7.03746 0.0 18.8758    
cufflinks 6.7669 0.0 18.1709    
cufflinks 50.348     High High
cufflinks 14.037     High  
cufflinks 28.767     High  
cufflinks 11.842     High  
cufflinks 9.587     High  
cufflinks 29.481     High  
cufflinks 15.799     High  
cufflinks 66.88     High High
cufflinks 27.266     High  
cufflinks 14.033     High  
cufflinks 13.743     High  
cufflinks 6.488     High Low
cufflinks 14.535     High  
cufflinks 26.538     High  
cufflinks 9.194     High Low
cufflinks 13.284     High  
cufflinks 12.951     High  

0 Strain