Gene : Glyma.07G055500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10666//PTHR10666:SF138 - UBIQUITIN Genomic Order:  555
Name:  ? Glyma.07G055500 Secondary Identifier:  ? PAC:30492830
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G055500 0.5kb upstream 0.5kb upstream 3825 true Chr07: 4894360-4898184 Glycine max
Glyma.07G055500 0.5kb upstream 0.5kb upstream 500 false Chr07: 4897685-4898184 Glycine max
Glyma.07G055500 0.5kb downstream 0.5kb downstream 3825 true Chr07: 4893860-4897684 Glycine max
Glyma.07G055500 0.5kb downstream 0.5kb downstream 500 false Chr07: 4893860-4894359 Glycine max
Glyma.07G055500 1.0kb upstream 1.0kb upstream 4325 true Chr07: 4894360-4898684 Glycine max
Glyma.07G055500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4897685-4898684 Glycine max
Glyma.07G055500 1.0kb downstream 1.0kb downstream 4325 true Chr07: 4893360-4897684 Glycine max
Glyma.07G055500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4893360-4894359 Glycine max
Glyma.07G055500 2.0kb upstream 2.0kb upstream 5325 true Chr07: 4894360-4899684 Glycine max
Glyma.07G055500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4897685-4899684 Glycine max
Glyma.07G055500 2.0kb downstream 2.0kb downstream 5325 true Chr07: 4892360-4897684 Glycine max
Glyma.07G055500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4892360-4894359 Glycine max
Glyma.07G055500 5.0kb upstream 5.0kb upstream 8325 true Chr07: 4894360-4902684 Glycine max
Glyma.07G055500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4897685-4902684 Glycine max
Glyma.07G055500 5.0kb downstream 5.0kb downstream 8325 true Chr07: 4889360-4897684 Glycine max
Glyma.07G055500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4889360-4894359 Glycine max
Glyma.07G055500 10.0kb upstream 10.0kb upstream 13325 true Chr07: 4894360-4907684 Glycine max
Glyma.07G055500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4897685-4907684 Glycine max
Glyma.07G055500 10.0kb downstream 10.0kb downstream 13325 true Chr07: 4884360-4897684 Glycine max
Glyma.07G055500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4884360-4894359 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313355 5265 Fabidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0163 0.0 44.3842    
cufflinks 6.45759 0.0 27.4839    
cufflinks 24.133 0.0 103.716 High High
cufflinks 6.39756 0.0 27.8652    
cufflinks 8.2592 0.0 33.3982    
cufflinks 25.0485 0.0 108.087 High High
cufflinks 5.76782 0.0 24.8445    
cufflinks 7.65144 0.0 31.843    
cufflinks 9.52101 0.0 38.1163    
cufflinks 5.648        
cufflinks 14.719     High High
cufflinks 6.774        
cufflinks 5.604        
cufflinks 3.933        
cufflinks 7.241     High  
cufflinks 4.429        
cufflinks 11.092     High High
cufflinks 4.431        
cufflinks 3.72       Low
cufflinks 3.748        
cufflinks 7.598     High  
cufflinks 4.108        
cufflinks 3.736        
cufflinks 13.131     High High
cufflinks 3.801        
cufflinks 10.697     High High

0 Strain