Gene : Glyma.07G056600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24031:SF265 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 25-RELATED Genomic Order:  566
Name:  ? Glyma.07G056600 Secondary Identifier:  ? PAC:30494508
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G056600 0.5kb upstream 0.5kb upstream 6764 true Chr07: 5017283-5024046 Glycine max
Glyma.07G056600 0.5kb upstream 0.5kb upstream 500 false Chr07: 5017283-5017782 Glycine max
Glyma.07G056600 0.5kb downstream 0.5kb downstream 6764 true Chr07: 5017783-5024546 Glycine max
Glyma.07G056600 0.5kb downstream 0.5kb downstream 500 false Chr07: 5024047-5024546 Glycine max
Glyma.07G056600 1.0kb upstream 1.0kb upstream 7264 true Chr07: 5016783-5024046 Glycine max
Glyma.07G056600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5016783-5017782 Glycine max
Glyma.07G056600 1.0kb downstream 1.0kb downstream 7264 true Chr07: 5017783-5025046 Glycine max
Glyma.07G056600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5024047-5025046 Glycine max
Glyma.07G056600 2.0kb upstream 2.0kb upstream 8264 true Chr07: 5015783-5024046 Glycine max
Glyma.07G056600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5015783-5017782 Glycine max
Glyma.07G056600 2.0kb downstream 2.0kb downstream 8264 true Chr07: 5017783-5026046 Glycine max
Glyma.07G056600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5024047-5026046 Glycine max
Glyma.07G056600 5.0kb upstream 5.0kb upstream 11264 true Chr07: 5012783-5024046 Glycine max
Glyma.07G056600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5012783-5017782 Glycine max
Glyma.07G056600 5.0kb downstream 5.0kb downstream 11264 true Chr07: 5017783-5029046 Glycine max
Glyma.07G056600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5024047-5029046 Glycine max
Glyma.07G056600 10.0kb upstream 10.0kb upstream 16264 true Chr07: 5007783-5024046 Glycine max
Glyma.07G056600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5007783-5017782 Glycine max
Glyma.07G056600 10.0kb downstream 10.0kb downstream 16264 true Chr07: 5017783-5034046 Glycine max
Glyma.07G056600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5024047-5034046 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311922 5265 Fabidae View MSA
124063521 5270 Rosid View MSA
123738215 5271 Pentapetalae View MSA
122794289 5272 Eudicot View MSA
122047115 5273 Angiosperm View MSA
121350061 5274 Embryophyte View MSA
123424072 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2493 0.0 49.3422   High
cufflinks 8.8541 0.0 23.6929    
cufflinks 2.27096 0.0 6.86575   Low
cufflinks 3.80567 0.0 10.7638    
cufflinks 5.41565 0.0 14.8094    
cufflinks 2.59835 0.0 7.69518    
cufflinks 5.89379 0.0 16.048    
cufflinks 3.48005 0.0 9.92937    
cufflinks 3.0021 0.0 8.71793    
cufflinks 1.729        
cufflinks 0.194       Low
cufflinks 2.518        
cufflinks 2.431        
cufflinks 3.174        
cufflinks 0.645        
cufflinks 6.883       High
cufflinks 0.71        
cufflinks 2.333        
cufflinks 5.566        
cufflinks 4.415        
cufflinks 0.283       Low
cufflinks 5.152        
cufflinks 7.156       High
cufflinks 0.181       Low
cufflinks 6.061       High
cufflinks 0.611        

0 Strain