Gene : Glyma.07G057600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Genomic Order:  576
Name:  ? Glyma.07G057600 Secondary Identifier:  ? PAC:30494020
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G057600 0.5kb upstream 0.5kb upstream 4271 true Chr07: 5110836-5115106 Glycine max
Glyma.07G057600 0.5kb upstream 0.5kb upstream 500 false Chr07: 5114607-5115106 Glycine max
Glyma.07G057600 0.5kb downstream 0.5kb downstream 4271 true Chr07: 5110336-5114606 Glycine max
Glyma.07G057600 0.5kb downstream 0.5kb downstream 500 false Chr07: 5110336-5110835 Glycine max
Glyma.07G057600 1.0kb upstream 1.0kb upstream 4771 true Chr07: 5110836-5115606 Glycine max
Glyma.07G057600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5114607-5115606 Glycine max
Glyma.07G057600 1.0kb downstream 1.0kb downstream 4771 true Chr07: 5109836-5114606 Glycine max
Glyma.07G057600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5109836-5110835 Glycine max
Glyma.07G057600 2.0kb upstream 2.0kb upstream 5771 true Chr07: 5110836-5116606 Glycine max
Glyma.07G057600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5114607-5116606 Glycine max
Glyma.07G057600 2.0kb downstream 2.0kb downstream 5771 true Chr07: 5108836-5114606 Glycine max
Glyma.07G057600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5108836-5110835 Glycine max
Glyma.07G057600 5.0kb upstream 5.0kb upstream 8771 true Chr07: 5110836-5119606 Glycine max
Glyma.07G057600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5114607-5119606 Glycine max
Glyma.07G057600 5.0kb downstream 5.0kb downstream 8771 true Chr07: 5105836-5114606 Glycine max
Glyma.07G057600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5105836-5110835 Glycine max
Glyma.07G057600 10.0kb upstream 10.0kb upstream 13771 true Chr07: 5110836-5124606 Glycine max
Glyma.07G057600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5114607-5124606 Glycine max
Glyma.07G057600 10.0kb downstream 10.0kb downstream 13771 true Chr07: 5100836-5114606 Glycine max
Glyma.07G057600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5100836-5110835 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304359 5265 Fabidae View MSA
124060800 5270 Rosid View MSA
123736639 5271 Pentapetalae View MSA
122792131 5272 Eudicot View MSA
122046585 5273 Angiosperm View MSA
121348167 5274 Embryophyte View MSA
123380754 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.97067 0.0 6.42686    
cufflinks 19.8173 0.0 52.9491   High
cufflinks 1.58895 0.0 5.3163    
cufflinks 11.5 0.0 30.8883   High
cufflinks 0.987459 0.0 3.47667    
cufflinks 8.40274 0.0 22.9506    
cufflinks 0.840073 0.0 2.99722   Low
cufflinks 7.38995 0.0 20.3654    
cufflinks 0.683452 0.0 2.46879   Low
cufflinks 12.099     High High
cufflinks 0.158       Low
cufflinks 1.485        
cufflinks 1.241        
cufflinks 1.663        
cufflinks 0.054       Low
cufflinks 6.82       High
cufflinks 0.225        
cufflinks 1.404        
cufflinks 14.777     High High
cufflinks 2.25        
cufflinks 0.384        
cufflinks 3.358        
cufflinks 2.791        
cufflinks 0.047     Low Low
cufflinks 5.383        
cufflinks 0.634        

0 Strain