Gene : Glyma.07G057700 G. max Wm82.a2.v1
Defline:  (1 of 7) PF11331 - Probable zinc-ribbon domain (zinc_ribbon_12) Genomic Order:  577
Name:  ? Glyma.07G057700 Secondary Identifier:  ? PAC:30495581
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G057700 0.5kb upstream 0.5kb upstream 5400 true Chr07: 5119229-5124628 Glycine max
Glyma.07G057700 0.5kb upstream 0.5kb upstream 500 false Chr07: 5124129-5124628 Glycine max
Glyma.07G057700 0.5kb downstream 0.5kb downstream 5400 true Chr07: 5118729-5124128 Glycine max
Glyma.07G057700 0.5kb downstream 0.5kb downstream 500 false Chr07: 5118729-5119228 Glycine max
Glyma.07G057700 1.0kb upstream 1.0kb upstream 5900 true Chr07: 5119229-5125128 Glycine max
Glyma.07G057700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5124129-5125128 Glycine max
Glyma.07G057700 1.0kb downstream 1.0kb downstream 5900 true Chr07: 5118229-5124128 Glycine max
Glyma.07G057700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5118229-5119228 Glycine max
Glyma.07G057700 2.0kb upstream 2.0kb upstream 6900 true Chr07: 5119229-5126128 Glycine max
Glyma.07G057700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5124129-5126128 Glycine max
Glyma.07G057700 2.0kb downstream 2.0kb downstream 6900 true Chr07: 5117229-5124128 Glycine max
Glyma.07G057700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5117229-5119228 Glycine max
Glyma.07G057700 5.0kb upstream 5.0kb upstream 9900 true Chr07: 5119229-5129128 Glycine max
Glyma.07G057700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5124129-5129128 Glycine max
Glyma.07G057700 5.0kb downstream 5.0kb downstream 9900 true Chr07: 5114229-5124128 Glycine max
Glyma.07G057700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5114229-5119228 Glycine max
Glyma.07G057700 10.0kb upstream 10.0kb upstream 14900 true Chr07: 5119229-5134128 Glycine max
Glyma.07G057700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5124129-5134128 Glycine max
Glyma.07G057700 10.0kb downstream 10.0kb downstream 14900 true Chr07: 5109229-5124128 Glycine max
Glyma.07G057700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5109229-5119228 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296889 5265 Fabidae View MSA
124071948 5270 Rosid View MSA
123741793 5271 Pentapetalae View MSA
122789454 5272 Eudicot View MSA
122050949 5273 Angiosperm View MSA
121349776 5274 Embryophyte View MSA
123381441 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.23725 0.0 11.5963    
cufflinks 2.37873 0.0 6.90236    
cufflinks 1.40739 0.0 4.36754   Low
cufflinks 7.18389 0.0 19.1951   High
cufflinks 2.99912 0.0 8.47129    
cufflinks 4.69588 0.0 12.7644    
cufflinks 2.3207 0.0 6.75128    
cufflinks 4.87275 0.0 13.2134    
cufflinks 2.06283 0.0 6.09345    
cufflinks 7.032       High
cufflinks 1.225       Low
cufflinks 2.571        
cufflinks 2.115        
cufflinks 2.053        
cufflinks 0.35       Low
cufflinks 6.207       High
cufflinks 4.6        
cufflinks 2.741        
cufflinks 2.972        
cufflinks 4.667        
cufflinks 1.583        
cufflinks 6.824       High
cufflinks 3.22        
cufflinks 2.81        
cufflinks 4.376        
cufflinks 5.088        

0 Strain