Gene : Glyma.07G057800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33978:SF2 - EXPRESSED PROTEIN Genomic Order:  578
Name:  ? Glyma.07G057800 Secondary Identifier:  ? PAC:30492688
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G057800 0.5kb upstream 0.5kb upstream 923 true Chr07: 5132274-5133196 Glycine max
Glyma.07G057800 0.5kb upstream 0.5kb upstream 500 false Chr07: 5132697-5133196 Glycine max
Glyma.07G057800 0.5kb downstream 0.5kb downstream 923 true Chr07: 5131774-5132696 Glycine max
Glyma.07G057800 0.5kb downstream 0.5kb downstream 500 false Chr07: 5131774-5132273 Glycine max
Glyma.07G057800 1.0kb upstream 1.0kb upstream 1423 true Chr07: 5132274-5133696 Glycine max
Glyma.07G057800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5132697-5133696 Glycine max
Glyma.07G057800 1.0kb downstream 1.0kb downstream 1423 true Chr07: 5131274-5132696 Glycine max
Glyma.07G057800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5131274-5132273 Glycine max
Glyma.07G057800 2.0kb upstream 2.0kb upstream 2423 true Chr07: 5132274-5134696 Glycine max
Glyma.07G057800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5132697-5134696 Glycine max
Glyma.07G057800 2.0kb downstream 2.0kb downstream 2423 true Chr07: 5130274-5132696 Glycine max
Glyma.07G057800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5130274-5132273 Glycine max
Glyma.07G057800 5.0kb upstream 5.0kb upstream 5423 true Chr07: 5132274-5137696 Glycine max
Glyma.07G057800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5132697-5137696 Glycine max
Glyma.07G057800 5.0kb downstream 5.0kb downstream 5423 true Chr07: 5127274-5132696 Glycine max
Glyma.07G057800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5127274-5132273 Glycine max
Glyma.07G057800 10.0kb upstream 10.0kb upstream 10423 true Chr07: 5132274-5142696 Glycine max
Glyma.07G057800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5132697-5142696 Glycine max
Glyma.07G057800 10.0kb downstream 10.0kb downstream 10423 true Chr07: 5122274-5132696 Glycine max
Glyma.07G057800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5122274-5132273 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
122313823 5265 Fabidae View MSA
124073990 5270 Rosid View MSA
123746126 5271 Pentapetalae View MSA
122796980 5272 Eudicot View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.70561 0.0 6.56873    
cufflinks 1.82439 0.0 6.99303    
cufflinks 0.561768 0.0 2.25757    
cufflinks 2.78284 0.0 10.4857    
cufflinks 2.51307 0.0 9.51735    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0995913 0.0 0.450746 Low Low
cufflinks 1.84328 0.0 7.0721    
cufflinks 0.386        
cufflinks 0.477        
cufflinks 1.859        
cufflinks 5.031       High
cufflinks 12.797     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.201        
cufflinks 0.216       Low
cufflinks 0.552        
cufflinks 2.987       High
cufflinks 0.932        
cufflinks 0.216       Low
cufflinks 1.021        
cufflinks 1.259        
cufflinks 0.406        
cufflinks 1.211        
cufflinks 0.511        

0 Strain