Gene : Glyma.07G059900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23410 - RIBOSOMAL PROTEIN L5-RELATED Genomic Order:  599
Name:  ? Glyma.07G059900 Secondary Identifier:  ? PAC:30492888
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G059900 0.5kb upstream 0.5kb upstream 3198 true Chr07: 5335302-5338499 Glycine max
Glyma.07G059900 0.5kb upstream 0.5kb upstream 500 false Chr07: 5338000-5338499 Glycine max
Glyma.07G059900 0.5kb downstream 0.5kb downstream 3198 true Chr07: 5334802-5337999 Glycine max
Glyma.07G059900 0.5kb downstream 0.5kb downstream 500 false Chr07: 5334802-5335301 Glycine max
Glyma.07G059900 1.0kb upstream 1.0kb upstream 3698 true Chr07: 5335302-5338999 Glycine max
Glyma.07G059900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5338000-5338999 Glycine max
Glyma.07G059900 1.0kb downstream 1.0kb downstream 3698 true Chr07: 5334302-5337999 Glycine max
Glyma.07G059900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5334302-5335301 Glycine max
Glyma.07G059900 2.0kb upstream 2.0kb upstream 4698 true Chr07: 5335302-5339999 Glycine max
Glyma.07G059900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5338000-5339999 Glycine max
Glyma.07G059900 2.0kb downstream 2.0kb downstream 4698 true Chr07: 5333302-5337999 Glycine max
Glyma.07G059900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5333302-5335301 Glycine max
Glyma.07G059900 5.0kb upstream 5.0kb upstream 7698 true Chr07: 5335302-5342999 Glycine max
Glyma.07G059900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5338000-5342999 Glycine max
Glyma.07G059900 5.0kb downstream 5.0kb downstream 7698 true Chr07: 5330302-5337999 Glycine max
Glyma.07G059900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5330302-5335301 Glycine max
Glyma.07G059900 10.0kb upstream 10.0kb upstream 12698 true Chr07: 5335302-5347999 Glycine max
Glyma.07G059900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5338000-5347999 Glycine max
Glyma.07G059900 10.0kb downstream 10.0kb downstream 12698 true Chr07: 5325302-5337999 Glycine max
Glyma.07G059900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5325302-5335301 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312221 5265 Fabidae View MSA
124061233 5270 Rosid View MSA
123751479 5271 Pentapetalae View MSA
122787634 5272 Eudicot View MSA
122045073 5273 Angiosperm View MSA
121347703 5274 Embryophyte View MSA
123424766 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 105.534 0.0 455.069 High  
cufflinks 151.232 0.0 635.555 High  
cufflinks 60.483 0.0 225.228 High Low
cufflinks 85.557 0.0 346.995 High  
cufflinks 265.524 0.0 1479.34 High High
cufflinks 144.649 0.0 599.372 High  
cufflinks 197.983 0.0 942.215 High  
cufflinks 123.101 0.0 479.348 High  
cufflinks 172.362 0.0 767.421 High  
cufflinks 26.711     High  
cufflinks 7.578     High Low
cufflinks 22.066     High  
cufflinks 89.621     High High
cufflinks 126.459     High High
cufflinks 8.555     High Low
cufflinks 29.703     High  
cufflinks 19.038     High  
cufflinks 23.018     High  
cufflinks 39.11     High  
cufflinks 20.151     High  
cufflinks 13.469     High  
cufflinks 21.794     High  
cufflinks 32.316     High  
cufflinks 9.534     High Low
cufflinks 27.379     High  
cufflinks 19.877     High  

0 Strain