Gene : Glyma.07G060000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23410 - RIBOSOMAL PROTEIN L5-RELATED Genomic Order:  600
Name:  ? Glyma.07G060000 Secondary Identifier:  ? PAC:30494167
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G060000 0.5kb upstream 0.5kb upstream 3297 true Chr07: 5342520-5345816 Glycine max
Glyma.07G060000 0.5kb upstream 0.5kb upstream 500 false Chr07: 5345317-5345816 Glycine max
Glyma.07G060000 0.5kb downstream 0.5kb downstream 3297 true Chr07: 5342020-5345316 Glycine max
Glyma.07G060000 0.5kb downstream 0.5kb downstream 500 false Chr07: 5342020-5342519 Glycine max
Glyma.07G060000 1.0kb upstream 1.0kb upstream 3797 true Chr07: 5342520-5346316 Glycine max
Glyma.07G060000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5345317-5346316 Glycine max
Glyma.07G060000 1.0kb downstream 1.0kb downstream 3797 true Chr07: 5341520-5345316 Glycine max
Glyma.07G060000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5341520-5342519 Glycine max
Glyma.07G060000 2.0kb upstream 2.0kb upstream 4797 true Chr07: 5342520-5347316 Glycine max
Glyma.07G060000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5345317-5347316 Glycine max
Glyma.07G060000 2.0kb downstream 2.0kb downstream 4797 true Chr07: 5340520-5345316 Glycine max
Glyma.07G060000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5340520-5342519 Glycine max
Glyma.07G060000 5.0kb upstream 5.0kb upstream 7797 true Chr07: 5342520-5350316 Glycine max
Glyma.07G060000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5345317-5350316 Glycine max
Glyma.07G060000 5.0kb downstream 5.0kb downstream 7797 true Chr07: 5337520-5345316 Glycine max
Glyma.07G060000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5337520-5342519 Glycine max
Glyma.07G060000 10.0kb upstream 10.0kb upstream 12797 true Chr07: 5342520-5355316 Glycine max
Glyma.07G060000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5345317-5355316 Glycine max
Glyma.07G060000 10.0kb downstream 10.0kb downstream 12797 true Chr07: 5332520-5345316 Glycine max
Glyma.07G060000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5332520-5342519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312221 5265 Fabidae View MSA
124061233 5270 Rosid View MSA
123751479 5271 Pentapetalae View MSA
122787634 5272 Eudicot View MSA
122045073 5273 Angiosperm View MSA
121347703 5274 Embryophyte View MSA
123424766 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.5975 0.0 382.944 High  
cufflinks 159.269 0.0 767.762 High  
cufflinks 54.5129 0.0 212.27 High Low
cufflinks 93.941 0.0 367.712 High  
cufflinks 271.136 0.0 1732.6 High High
cufflinks 171.117 0.0 846.861 High  
cufflinks 169.141 0.0 831.717 High  
cufflinks 120.88 0.0 521.292 High  
cufflinks 171.895 0.0 859.174 High  
cufflinks 32.652     High  
cufflinks 7.29     High Low
cufflinks 26.619     High  
cufflinks 102.78     High High
cufflinks 152.023     High High
cufflinks 8.435     High Low
cufflinks 28.858     High  
cufflinks 18.454     High  
cufflinks 28.555     High  
cufflinks 44.234     High  
cufflinks 18.228     High  
cufflinks 13.121     High  
cufflinks 19.717     High  
cufflinks 34.931     High  
cufflinks 8.257     High Low
cufflinks 26.572     High  
cufflinks 19.321     High  

0 Strain