Gene : Glyma.07G106900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR14927:SF0 - NUCLEOLAR PROTEIN 10 Genomic Order:  1069
Name:  ? Glyma.07G106900 Secondary Identifier:  ? PAC:30495351
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G106900 0.5kb upstream 0.5kb upstream 8741 true Chr07: 10411770-10420510 Glycine max
Glyma.07G106900 0.5kb upstream 0.5kb upstream 500 false Chr07: 10411770-10412269 Glycine max
Glyma.07G106900 0.5kb downstream 0.5kb downstream 8741 true Chr07: 10412270-10421010 Glycine max
Glyma.07G106900 0.5kb downstream 0.5kb downstream 500 false Chr07: 10420511-10421010 Glycine max
Glyma.07G106900 1.0kb upstream 1.0kb upstream 9241 true Chr07: 10411270-10420510 Glycine max
Glyma.07G106900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10411270-10412269 Glycine max
Glyma.07G106900 1.0kb downstream 1.0kb downstream 9241 true Chr07: 10412270-10421510 Glycine max
Glyma.07G106900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10420511-10421510 Glycine max
Glyma.07G106900 2.0kb upstream 2.0kb upstream 10241 true Chr07: 10410270-10420510 Glycine max
Glyma.07G106900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10410270-10412269 Glycine max
Glyma.07G106900 2.0kb downstream 2.0kb downstream 10241 true Chr07: 10412270-10422510 Glycine max
Glyma.07G106900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10420511-10422510 Glycine max
Glyma.07G106900 5.0kb upstream 5.0kb upstream 13241 true Chr07: 10407270-10420510 Glycine max
Glyma.07G106900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10407270-10412269 Glycine max
Glyma.07G106900 5.0kb downstream 5.0kb downstream 13241 true Chr07: 10412270-10425510 Glycine max
Glyma.07G106900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10420511-10425510 Glycine max
Glyma.07G106900 10.0kb upstream 10.0kb upstream 18241 true Chr07: 10402270-10420510 Glycine max
Glyma.07G106900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10402270-10412269 Glycine max
Glyma.07G106900 10.0kb downstream 10.0kb downstream 18241 true Chr07: 10412270-10430510 Glycine max
Glyma.07G106900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10420511-10430510 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303844 5265 Fabidae View MSA
124061255 5270 Rosid View MSA
123740786 5271 Pentapetalae View MSA
122786352 5272 Eudicot View MSA
122042207 5273 Angiosperm View MSA
121344508 5274 Embryophyte View MSA
123424204 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.92059 0.0 13.4384    
cufflinks 3.51176 0.0 9.87226    
cufflinks 1.72795 0.0 5.3046   Low
cufflinks 3.30487 0.0 9.33731    
cufflinks 5.73767 0.0 15.5207   High
cufflinks 2.24382 0.0 6.65692   Low
cufflinks 5.08697 0.0 13.8699    
cufflinks 3.47212 0.0 9.75662    
cufflinks 3.97789 0.0 11.0424    
cufflinks 1.005        
cufflinks 0.274       Low
cufflinks 1.211        
cufflinks 2.507       High
cufflinks 3.568       High
cufflinks 0.771        
cufflinks 0.808        
cufflinks 0.609        
cufflinks 0.986        
cufflinks 1.704       High
cufflinks 0.569        
cufflinks 0.494        
cufflinks 0.766        
cufflinks 1.45        
cufflinks 0.4       Low
cufflinks 0.742        
cufflinks 0.65        

0 Strain