Gene : Glyma.07G107300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31421:SF0 - PROTEIN BASIC PENTACYSTEINE1-RELATED Genomic Order:  1073
Name:  ? Glyma.07G107300 Secondary Identifier:  ? PAC:30493499
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G107300 0.5kb upstream 0.5kb upstream 2937 true Chr07: 10470819-10473755 Glycine max
Glyma.07G107300 0.5kb upstream 0.5kb upstream 500 false Chr07: 10473256-10473755 Glycine max
Glyma.07G107300 0.5kb downstream 0.5kb downstream 2937 true Chr07: 10470319-10473255 Glycine max
Glyma.07G107300 0.5kb downstream 0.5kb downstream 500 false Chr07: 10470319-10470818 Glycine max
Glyma.07G107300 1.0kb upstream 1.0kb upstream 3437 true Chr07: 10470819-10474255 Glycine max
Glyma.07G107300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10473256-10474255 Glycine max
Glyma.07G107300 1.0kb downstream 1.0kb downstream 3437 true Chr07: 10469819-10473255 Glycine max
Glyma.07G107300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10469819-10470818 Glycine max
Glyma.07G107300 2.0kb upstream 2.0kb upstream 4437 true Chr07: 10470819-10475255 Glycine max
Glyma.07G107300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10473256-10475255 Glycine max
Glyma.07G107300 2.0kb downstream 2.0kb downstream 4437 true Chr07: 10468819-10473255 Glycine max
Glyma.07G107300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10468819-10470818 Glycine max
Glyma.07G107300 5.0kb upstream 5.0kb upstream 7437 true Chr07: 10470819-10478255 Glycine max
Glyma.07G107300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10473256-10478255 Glycine max
Glyma.07G107300 5.0kb downstream 5.0kb downstream 7437 true Chr07: 10465819-10473255 Glycine max
Glyma.07G107300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10465819-10470818 Glycine max
Glyma.07G107300 10.0kb upstream 10.0kb upstream 12437 true Chr07: 10470819-10483255 Glycine max
Glyma.07G107300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10473256-10483255 Glycine max
Glyma.07G107300 10.0kb downstream 10.0kb downstream 12437 true Chr07: 10460819-10473255 Glycine max
Glyma.07G107300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10460819-10470818 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254958 5265 Fabidae View MSA
124070545 5270 Rosid View MSA
123750720 5271 Pentapetalae View MSA
122788133 5272 Eudicot View MSA
122049801 5273 Angiosperm View MSA
121311594 5274 Embryophyte View MSA
123348870 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.87233 0.0 16.6727   Low
cufflinks 13.4723 0.0 36.0928    
cufflinks 9.65423 0.0 26.1985    
cufflinks 9.47851 0.0 25.7947    
cufflinks 8.24996 0.0 22.6831    
cufflinks 10.2924 0.0 27.8573    
cufflinks 25.7796 0.0 69.2485 High High
cufflinks 7.97174 0.0 21.9811    
cufflinks 9.7992 0.0 26.6134    
cufflinks 4.703       Low
cufflinks 9.405     High High
cufflinks 6.526        
cufflinks 5.481        
cufflinks 8.036     High  
cufflinks 9.891     High High
cufflinks 6.083        
cufflinks 3.88       Low
cufflinks 5.874        
cufflinks 8.797     High High
cufflinks 6.206        
cufflinks 8.346     High  
cufflinks 6.422        
cufflinks 5.826        
cufflinks 8.746     High High
cufflinks 6.224        
cufflinks 6.999     High  

0 Strain