Gene : Glyma.07G109600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31251:SF4 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 Genomic Order:  1096
Name:  ? Glyma.07G109600 Secondary Identifier:  ? PAC:30493040
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G109600 0.5kb upstream 0.5kb upstream 3567 true Chr07: 11048836-11052402 Glycine max
Glyma.07G109600 0.5kb upstream 0.5kb upstream 500 false Chr07: 11051903-11052402 Glycine max
Glyma.07G109600 0.5kb downstream 0.5kb downstream 3567 true Chr07: 11048336-11051902 Glycine max
Glyma.07G109600 0.5kb downstream 0.5kb downstream 500 false Chr07: 11048336-11048835 Glycine max
Glyma.07G109600 1.0kb upstream 1.0kb upstream 4067 true Chr07: 11048836-11052902 Glycine max
Glyma.07G109600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11051903-11052902 Glycine max
Glyma.07G109600 1.0kb downstream 1.0kb downstream 4067 true Chr07: 11047836-11051902 Glycine max
Glyma.07G109600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11047836-11048835 Glycine max
Glyma.07G109600 2.0kb upstream 2.0kb upstream 5067 true Chr07: 11048836-11053902 Glycine max
Glyma.07G109600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11051903-11053902 Glycine max
Glyma.07G109600 2.0kb downstream 2.0kb downstream 5067 true Chr07: 11046836-11051902 Glycine max
Glyma.07G109600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11046836-11048835 Glycine max
Glyma.07G109600 5.0kb upstream 5.0kb upstream 8067 true Chr07: 11048836-11056902 Glycine max
Glyma.07G109600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11051903-11056902 Glycine max
Glyma.07G109600 5.0kb downstream 5.0kb downstream 8067 true Chr07: 11043836-11051902 Glycine max
Glyma.07G109600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11043836-11048835 Glycine max
Glyma.07G109600 10.0kb upstream 10.0kb upstream 13067 true Chr07: 11048836-11061902 Glycine max
Glyma.07G109600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11051903-11061902 Glycine max
Glyma.07G109600 10.0kb downstream 10.0kb downstream 13067 true Chr07: 11038836-11051902 Glycine max
Glyma.07G109600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11038836-11048835 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300489 5265 Fabidae View MSA
124061003 5270 Rosid View MSA
123751132 5271 Pentapetalae View MSA
122790055 5272 Eudicot View MSA
122042410 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121309962 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.63434 0.0 5.52661    
cufflinks 42.5812 0.0 117.684 High High
cufflinks 21.8382 0.0 58.2885 High High
cufflinks 21.0073 0.0 56.0835 High  
cufflinks 0.518919 0.0 1.9106   Low
cufflinks 0.967499 0.0 3.43178    
cufflinks 5.62155 0.0 16.0402    
cufflinks 5.69337 0.0 16.276    
cufflinks 0.85568 0.0 3.06335    
cufflinks 8.199     High  
cufflinks 0.007     Low Low
cufflinks 20.368     High High
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 5.629        
cufflinks 0.068     Low  
cufflinks 14.562     High  
cufflinks 27.823     High High
cufflinks 2.945        
cufflinks 0.087        
cufflinks 4.659        
cufflinks 11.108     High  
cufflinks 0.036     Low  
cufflinks 3.562        
cufflinks 0.04     Low  

0 Strain