Gene : Glyma.07G112000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  1120
Name:  ? Glyma.07G112000 Secondary Identifier:  ? PAC:30494814
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G112000 0.5kb upstream 0.5kb upstream 2600 true Chr07: 11575654-11578253 Glycine max
Glyma.07G112000 0.5kb upstream 0.5kb upstream 500 false Chr07: 11577754-11578253 Glycine max
Glyma.07G112000 0.5kb downstream 0.5kb downstream 2600 true Chr07: 11575154-11577753 Glycine max
Glyma.07G112000 0.5kb downstream 0.5kb downstream 500 false Chr07: 11575154-11575653 Glycine max
Glyma.07G112000 1.0kb upstream 1.0kb upstream 3100 true Chr07: 11575654-11578753 Glycine max
Glyma.07G112000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11577754-11578753 Glycine max
Glyma.07G112000 1.0kb downstream 1.0kb downstream 3100 true Chr07: 11574654-11577753 Glycine max
Glyma.07G112000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11574654-11575653 Glycine max
Glyma.07G112000 2.0kb upstream 2.0kb upstream 4100 true Chr07: 11575654-11579753 Glycine max
Glyma.07G112000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11577754-11579753 Glycine max
Glyma.07G112000 2.0kb downstream 2.0kb downstream 4100 true Chr07: 11573654-11577753 Glycine max
Glyma.07G112000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11573654-11575653 Glycine max
Glyma.07G112000 5.0kb upstream 5.0kb upstream 7100 true Chr07: 11575654-11582753 Glycine max
Glyma.07G112000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11577754-11582753 Glycine max
Glyma.07G112000 5.0kb downstream 5.0kb downstream 7100 true Chr07: 11570654-11577753 Glycine max
Glyma.07G112000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11570654-11575653 Glycine max
Glyma.07G112000 10.0kb upstream 10.0kb upstream 12100 true Chr07: 11575654-11587753 Glycine max
Glyma.07G112000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11577754-11587753 Glycine max
Glyma.07G112000 10.0kb downstream 10.0kb downstream 12100 true Chr07: 11565654-11577753 Glycine max
Glyma.07G112000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11565654-11575653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306013 5265 Fabidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 347.768 0.0 2265.78 High High
cufflinks 257.987 0.0 1412.12 High High
cufflinks 43.0237 0.0 153.505 High  
cufflinks 180.841 0.0 837.073 High  
cufflinks 16.6762 0.0 50.8089   Low
cufflinks 19.4799 0.0 58.5155    
cufflinks 108.9 0.0 487.595 High  
cufflinks 102.474 0.0 447.982 High  
cufflinks 10.2822 0.0 40.6108   Low
cufflinks 68.354     High  
cufflinks 0.265       Low
cufflinks 30.083     High  
cufflinks 0.473        
cufflinks 0.264       Low
cufflinks 0.547        
cufflinks 245.799     High High
cufflinks 0.339       Low
cufflinks 39.726     High  
cufflinks 65.943     High  
cufflinks 284.944     High High
cufflinks 0.3       Low
cufflinks 249.972     High High
cufflinks 212.421     High High
cufflinks 0.283       Low
cufflinks 278.314     High High
cufflinks 0.324       Low

0 Strain