Gene : Glyma.07G114800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR24073:SF520 - RAS-RELATED PROTEIN RABD2B-RELATED Genomic Order:  1148
Name:  ? Glyma.07G114800 Secondary Identifier:  ? PAC:30493121
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G114800 0.5kb upstream 0.5kb upstream 4408 true Chr07: 12183198-12187605 Glycine max
Glyma.07G114800 0.5kb upstream 0.5kb upstream 500 false Chr07: 12187106-12187605 Glycine max
Glyma.07G114800 0.5kb downstream 0.5kb downstream 4408 true Chr07: 12182698-12187105 Glycine max
Glyma.07G114800 0.5kb downstream 0.5kb downstream 500 false Chr07: 12182698-12183197 Glycine max
Glyma.07G114800 1.0kb upstream 1.0kb upstream 4908 true Chr07: 12183198-12188105 Glycine max
Glyma.07G114800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 12187106-12188105 Glycine max
Glyma.07G114800 1.0kb downstream 1.0kb downstream 4908 true Chr07: 12182198-12187105 Glycine max
Glyma.07G114800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 12182198-12183197 Glycine max
Glyma.07G114800 2.0kb upstream 2.0kb upstream 5908 true Chr07: 12183198-12189105 Glycine max
Glyma.07G114800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 12187106-12189105 Glycine max
Glyma.07G114800 2.0kb downstream 2.0kb downstream 5908 true Chr07: 12181198-12187105 Glycine max
Glyma.07G114800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 12181198-12183197 Glycine max
Glyma.07G114800 5.0kb upstream 5.0kb upstream 8908 true Chr07: 12183198-12192105 Glycine max
Glyma.07G114800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 12187106-12192105 Glycine max
Glyma.07G114800 5.0kb downstream 5.0kb downstream 8908 true Chr07: 12178198-12187105 Glycine max
Glyma.07G114800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 12178198-12183197 Glycine max
Glyma.07G114800 10.0kb upstream 10.0kb upstream 13908 true Chr07: 12183198-12197105 Glycine max
Glyma.07G114800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 12187106-12197105 Glycine max
Glyma.07G114800 10.0kb downstream 10.0kb downstream 13908 true Chr07: 12173198-12187105 Glycine max
Glyma.07G114800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 12173198-12183197 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238604 5265 Fabidae Singleton cluster - no MSA
124075522 5270 Rosid View MSA
123746396 5271 Pentapetalae View MSA
122771895 5272 Eudicot View MSA
122051400 5273 Angiosperm View MSA
121350724 5274 Embryophyte View MSA
123381858 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.064627 0.0 0.296908 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.26        
cufflinks 0.282        
cufflinks 0.288        
cufflinks 0.373       High
cufflinks 0.26        
cufflinks 0.158        
cufflinks 0.154        
cufflinks 0.368        
cufflinks 0.254        
cufflinks 0.179        
cufflinks 0.062     Low Low
cufflinks 0.251        
cufflinks 0.073     Low Low
cufflinks 0.109       Low
cufflinks 0.541       High
cufflinks 0.09     Low Low
cufflinks 0.316        

0 Strain