Gene : Glyma.07G102400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23180:SF290 - C2 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1024
Name:  ? Glyma.07G102400 Secondary Identifier:  ? PAC:30494666
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G102400 0.5kb upstream 0.5kb upstream 5590 true Chr07: 9765528-9771117 Glycine max
Glyma.07G102400 0.5kb upstream 0.5kb upstream 500 false Chr07: 9765528-9766027 Glycine max
Glyma.07G102400 0.5kb downstream 0.5kb downstream 5590 true Chr07: 9766028-9771617 Glycine max
Glyma.07G102400 0.5kb downstream 0.5kb downstream 500 false Chr07: 9771118-9771617 Glycine max
Glyma.07G102400 1.0kb upstream 1.0kb upstream 6090 true Chr07: 9765028-9771117 Glycine max
Glyma.07G102400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9765028-9766027 Glycine max
Glyma.07G102400 1.0kb downstream 1.0kb downstream 6090 true Chr07: 9766028-9772117 Glycine max
Glyma.07G102400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9771118-9772117 Glycine max
Glyma.07G102400 2.0kb upstream 2.0kb upstream 7090 true Chr07: 9764028-9771117 Glycine max
Glyma.07G102400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9764028-9766027 Glycine max
Glyma.07G102400 2.0kb downstream 2.0kb downstream 7090 true Chr07: 9766028-9773117 Glycine max
Glyma.07G102400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9771118-9773117 Glycine max
Glyma.07G102400 5.0kb upstream 5.0kb upstream 10090 true Chr07: 9761028-9771117 Glycine max
Glyma.07G102400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9761028-9766027 Glycine max
Glyma.07G102400 5.0kb downstream 5.0kb downstream 10090 true Chr07: 9766028-9776117 Glycine max
Glyma.07G102400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9771118-9776117 Glycine max
Glyma.07G102400 10.0kb upstream 10.0kb upstream 15090 true Chr07: 9756028-9771117 Glycine max
Glyma.07G102400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9756028-9766027 Glycine max
Glyma.07G102400 10.0kb downstream 10.0kb downstream 15090 true Chr07: 9766028-9781117 Glycine max
Glyma.07G102400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9771118-9781117 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311894 5265 Fabidae View MSA
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.08 0.0 15.9595    
cufflinks 3.3235 0.0 11.5749    
cufflinks 6.42583 0.0 23.8607    
cufflinks 8.77006 0.0 30.0054    
cufflinks 4.0925 0.0 20.8599    
cufflinks 20.9958 0.0 72.2006   High
cufflinks 2.09125 0.0 11.3407   Low
cufflinks 5.59896 0.0 16.8545    
cufflinks 9.65615 0.0 37.3421    
cufflinks 0.5        
cufflinks 0.992       High
cufflinks 0.716        
cufflinks 0.433        
cufflinks 0.436        
cufflinks 0.978       High
cufflinks 0.384       Low
cufflinks 0.336       Low
cufflinks 1.232       High
cufflinks 0.443        
cufflinks 0.481        
cufflinks 0.769        
cufflinks 0.542        
cufflinks 0.39       Low
cufflinks 1.2       High
cufflinks 0.563        
cufflinks 0.542        

0 Strain