Gene : Glyma.07G102600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10894:SF0 - NUCLEOLAR PROTEIN 56 Genomic Order:  1026
Name:  ? Glyma.07G102600 Secondary Identifier:  ? PAC:30492440
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G102600 0.5kb upstream 0.5kb upstream 4907 true Chr07: 9809390-9814296 Glycine max
Glyma.07G102600 0.5kb upstream 0.5kb upstream 500 false Chr07: 9809390-9809889 Glycine max
Glyma.07G102600 0.5kb downstream 0.5kb downstream 4907 true Chr07: 9809890-9814796 Glycine max
Glyma.07G102600 0.5kb downstream 0.5kb downstream 500 false Chr07: 9814297-9814796 Glycine max
Glyma.07G102600 1.0kb upstream 1.0kb upstream 5407 true Chr07: 9808890-9814296 Glycine max
Glyma.07G102600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9808890-9809889 Glycine max
Glyma.07G102600 1.0kb downstream 1.0kb downstream 5407 true Chr07: 9809890-9815296 Glycine max
Glyma.07G102600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9814297-9815296 Glycine max
Glyma.07G102600 2.0kb upstream 2.0kb upstream 6407 true Chr07: 9807890-9814296 Glycine max
Glyma.07G102600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9807890-9809889 Glycine max
Glyma.07G102600 2.0kb downstream 2.0kb downstream 6407 true Chr07: 9809890-9816296 Glycine max
Glyma.07G102600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9814297-9816296 Glycine max
Glyma.07G102600 5.0kb upstream 5.0kb upstream 9407 true Chr07: 9804890-9814296 Glycine max
Glyma.07G102600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9804890-9809889 Glycine max
Glyma.07G102600 5.0kb downstream 5.0kb downstream 9407 true Chr07: 9809890-9819296 Glycine max
Glyma.07G102600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9814297-9819296 Glycine max
Glyma.07G102600 10.0kb upstream 10.0kb upstream 14407 true Chr07: 9799890-9814296 Glycine max
Glyma.07G102600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9799890-9809889 Glycine max
Glyma.07G102600 10.0kb downstream 10.0kb downstream 14407 true Chr07: 9809890-9824296 Glycine max
Glyma.07G102600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9814297-9824296 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310756 5265 Fabidae View MSA
124068529 5270 Rosid View MSA
123741433 5271 Pentapetalae View MSA
122793119 5272 Eudicot View MSA
122042292 5273 Angiosperm View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8416 0.0 31.7165    
cufflinks 22.2689 0.0 59.8004 High High
cufflinks 9.69532 0.0 26.1481   Low
cufflinks 17.2983 0.0 46.1813    
cufflinks 12.2617 0.0 32.8091    
cufflinks 8.67183 0.0 23.5457   Low
cufflinks 15.5177 0.0 41.4001    
cufflinks 15.461 0.0 41.2482    
cufflinks 11.7254 0.0 31.4068    
cufflinks 6.12        
cufflinks 1.39       Low
cufflinks 6.645        
cufflinks 6.19        
cufflinks 6.655        
cufflinks 3.176        
cufflinks 9.984     High  
cufflinks 3.42        
cufflinks 7.06        
cufflinks 10.249     High High
cufflinks 9.797     High  
cufflinks 2.183       Low
cufflinks 9.527     High  
cufflinks 9.684     High  
cufflinks 2.087       Low
cufflinks 9.822     High  
cufflinks 2.883        

0 Strain