Gene : Glyma.07G105000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12914 - PARTNER OF SLD5 Genomic Order:  1050
Name:  ? Glyma.07G105000 Secondary Identifier:  ? PAC:30491575
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G105000 0.5kb upstream 0.5kb upstream 4227 true Chr07: 10175238-10179464 Glycine max
Glyma.07G105000 0.5kb upstream 0.5kb upstream 500 false Chr07: 10178965-10179464 Glycine max
Glyma.07G105000 0.5kb downstream 0.5kb downstream 4227 true Chr07: 10174738-10178964 Glycine max
Glyma.07G105000 0.5kb downstream 0.5kb downstream 500 false Chr07: 10174738-10175237 Glycine max
Glyma.07G105000 1.0kb upstream 1.0kb upstream 4727 true Chr07: 10175238-10179964 Glycine max
Glyma.07G105000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10178965-10179964 Glycine max
Glyma.07G105000 1.0kb downstream 1.0kb downstream 4727 true Chr07: 10174238-10178964 Glycine max
Glyma.07G105000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10174238-10175237 Glycine max
Glyma.07G105000 2.0kb upstream 2.0kb upstream 5727 true Chr07: 10175238-10180964 Glycine max
Glyma.07G105000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10178965-10180964 Glycine max
Glyma.07G105000 2.0kb downstream 2.0kb downstream 5727 true Chr07: 10173238-10178964 Glycine max
Glyma.07G105000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10173238-10175237 Glycine max
Glyma.07G105000 5.0kb upstream 5.0kb upstream 8727 true Chr07: 10175238-10183964 Glycine max
Glyma.07G105000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10178965-10183964 Glycine max
Glyma.07G105000 5.0kb downstream 5.0kb downstream 8727 true Chr07: 10170238-10178964 Glycine max
Glyma.07G105000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10170238-10175237 Glycine max
Glyma.07G105000 10.0kb upstream 10.0kb upstream 13727 true Chr07: 10175238-10188964 Glycine max
Glyma.07G105000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10178965-10188964 Glycine max
Glyma.07G105000 10.0kb downstream 10.0kb downstream 13727 true Chr07: 10165238-10178964 Glycine max
Glyma.07G105000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10165238-10175237 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308679 5265 Fabidae View MSA
124065475 5270 Rosid View MSA
123736911 5271 Pentapetalae View MSA
122793813 5272 Eudicot View MSA
122045601 5273 Angiosperm View MSA
121344655 5274 Embryophyte View MSA
123424278 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.271298 0.0 1.05652   Low
cufflinks 2.87217 0.0 9.66072    
cufflinks 0.284791 0.0 1.10498   Low
cufflinks 0.517895 0.0 1.95947    
cufflinks 2.88146 0.0 9.71209    
cufflinks 3.46464 0.0 11.3892   High
cufflinks 0.605768 0.0 2.2798    
cufflinks 1.41744 0.0 5.08215    
cufflinks 2.45955 0.0 8.4249    
cufflinks 0.538        
cufflinks 0.139        
cufflinks 0.299        
cufflinks 1.927       High
cufflinks 1.804       High
cufflinks 0.05     Low Low
cufflinks 0.475        
cufflinks 0.186        
cufflinks 0.201        
cufflinks 0.893        
cufflinks 0.272        
cufflinks 0.162        
cufflinks 0.309        
cufflinks 1.173       High
cufflinks 0.222        
cufflinks 0.346        
cufflinks 0.344        

0 Strain