Gene : Glyma.07G105900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12701:SF20 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIG5 Genomic Order:  1059
Name:  ? Glyma.07G105900 Secondary Identifier:  ? PAC:30492570
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G105900 0.5kb upstream 0.5kb upstream 4973 true Chr07: 10259018-10263990 Glycine max
Glyma.07G105900 0.5kb upstream 0.5kb upstream 500 false Chr07: 10259018-10259517 Glycine max
Glyma.07G105900 0.5kb downstream 0.5kb downstream 4973 true Chr07: 10259518-10264490 Glycine max
Glyma.07G105900 0.5kb downstream 0.5kb downstream 500 false Chr07: 10263991-10264490 Glycine max
Glyma.07G105900 1.0kb upstream 1.0kb upstream 5473 true Chr07: 10258518-10263990 Glycine max
Glyma.07G105900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10258518-10259517 Glycine max
Glyma.07G105900 1.0kb downstream 1.0kb downstream 5473 true Chr07: 10259518-10264990 Glycine max
Glyma.07G105900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10263991-10264990 Glycine max
Glyma.07G105900 2.0kb upstream 2.0kb upstream 6473 true Chr07: 10257518-10263990 Glycine max
Glyma.07G105900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10257518-10259517 Glycine max
Glyma.07G105900 2.0kb downstream 2.0kb downstream 6473 true Chr07: 10259518-10265990 Glycine max
Glyma.07G105900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10263991-10265990 Glycine max
Glyma.07G105900 5.0kb upstream 5.0kb upstream 9473 true Chr07: 10254518-10263990 Glycine max
Glyma.07G105900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10254518-10259517 Glycine max
Glyma.07G105900 5.0kb downstream 5.0kb downstream 9473 true Chr07: 10259518-10268990 Glycine max
Glyma.07G105900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10263991-10268990 Glycine max
Glyma.07G105900 10.0kb upstream 10.0kb upstream 14473 true Chr07: 10249518-10263990 Glycine max
Glyma.07G105900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10249518-10259517 Glycine max
Glyma.07G105900 10.0kb downstream 10.0kb downstream 14473 true Chr07: 10259518-10273990 Glycine max
Glyma.07G105900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10263991-10273990 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311009 5265 Fabidae View MSA
124061614 5270 Rosid View MSA
123738808 5271 Pentapetalae View MSA
122789098 5272 Eudicot View MSA
122042109 5273 Angiosperm View MSA
121344883 5274 Embryophyte View MSA
123380122 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.0472 0.0 78.223 High  
cufflinks 40.6672 0.0 108.539 High  
cufflinks 21.6758 0.0 59.2552 High Low
cufflinks 35.1371 0.0 94.0082 High  
cufflinks 39.2673 0.0 104.836 High  
cufflinks 47.5917 0.0 127.007 High  
cufflinks 41.9265 0.0 111.884 High  
cufflinks 60.5341 0.0 162.296 High High
cufflinks 32.425 0.0 86.9307 High  
cufflinks 8.236     High High
cufflinks 3.142        
cufflinks 3.275        
cufflinks 8.224     High High
cufflinks 8.876     High High
cufflinks 1.404       Low
cufflinks 4.087        
cufflinks 4.167        
cufflinks 4.89        
cufflinks 5.861        
cufflinks 3.89        
cufflinks 4.751        
cufflinks 4.184        
cufflinks 4.96        
cufflinks 3.763        
cufflinks 3.761        
cufflinks 4.587        

0 Strain