Gene : PhHAL.5G178400 P. hallii HAL v2.1

Defline:  (1 of 4) K03940 - NADH dehydrogenase (ubiquinone) Fe-S protein 7 (NDUFS7) Genomic Order:  1747
Name:  ? PhHAL.5G178400 Secondary Identifier:  ? PAC:40425756

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-3781 Panicum hallii HAL pathologic  
PhalliiHAL PWY-4302 Panicum hallii HAL pathologic  
PhalliiHAL PWY-5083 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G178400 0.5kb upstream 0.5kb upstream 2551 true Chr05: 10262181-10264731 Panicum hallii HAL
PhHAL.5G178400 0.5kb upstream 0.5kb upstream 500 false Chr05: 10262181-10262680 Panicum hallii HAL
PhHAL.5G178400 0.5kb downstream 0.5kb downstream 2551 true Chr05: 10262681-10265231 Panicum hallii HAL
PhHAL.5G178400 0.5kb downstream 0.5kb downstream 500 false Chr05: 10264732-10265231 Panicum hallii HAL
PhHAL.5G178400 1.0kb upstream 1.0kb upstream 3051 true Chr05: 10261681-10264731 Panicum hallii HAL
PhHAL.5G178400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10261681-10262680 Panicum hallii HAL
PhHAL.5G178400 1.0kb downstream 1.0kb downstream 3051 true Chr05: 10262681-10265731 Panicum hallii HAL
PhHAL.5G178400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10264732-10265731 Panicum hallii HAL
PhHAL.5G178400 2.0kb upstream 2.0kb upstream 4051 true Chr05: 10260681-10264731 Panicum hallii HAL
PhHAL.5G178400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10260681-10262680 Panicum hallii HAL
PhHAL.5G178400 2.0kb downstream 2.0kb downstream 4051 true Chr05: 10262681-10266731 Panicum hallii HAL
PhHAL.5G178400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10264732-10266731 Panicum hallii HAL
PhHAL.5G178400 5.0kb upstream 5.0kb upstream 7051 true Chr05: 10257681-10264731 Panicum hallii HAL
PhHAL.5G178400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10257681-10262680 Panicum hallii HAL
PhHAL.5G178400 5.0kb downstream 5.0kb downstream 7051 true Chr05: 10262681-10269731 Panicum hallii HAL
PhHAL.5G178400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10264732-10269731 Panicum hallii HAL
PhHAL.5G178400 10.0kb upstream 10.0kb upstream 12051 true Chr05: 10252681-10264731 Panicum hallii HAL
PhHAL.5G178400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10252681-10262680 Panicum hallii HAL
PhHAL.5G178400 10.0kb downstream 10.0kb downstream 12051 true Chr05: 10262681-10274731 Panicum hallii HAL
PhHAL.5G178400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10264732-10274731 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041386 5273 Angiosperm View MSA
122186829 5267 Panicoideae View MSA
124587416 5269 Grass View MSA
121350151 5274 Embryophyte View MSA
123428091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier