Gene : Glyma.07G091400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED Genomic Order:  914
Name:  ? Glyma.07G091400 Secondary Identifier:  ? PAC:30492033
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G091400 0.5kb upstream 0.5kb upstream 8401 true Chr07: 8538601-8547001 Glycine max
Glyma.07G091400 0.5kb upstream 0.5kb upstream 500 false Chr07: 8538601-8539100 Glycine max
Glyma.07G091400 0.5kb downstream 0.5kb downstream 8401 true Chr07: 8539101-8547501 Glycine max
Glyma.07G091400 0.5kb downstream 0.5kb downstream 500 false Chr07: 8547002-8547501 Glycine max
Glyma.07G091400 1.0kb upstream 1.0kb upstream 8901 true Chr07: 8538101-8547001 Glycine max
Glyma.07G091400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8538101-8539100 Glycine max
Glyma.07G091400 1.0kb downstream 1.0kb downstream 8901 true Chr07: 8539101-8548001 Glycine max
Glyma.07G091400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8547002-8548001 Glycine max
Glyma.07G091400 2.0kb upstream 2.0kb upstream 9901 true Chr07: 8537101-8547001 Glycine max
Glyma.07G091400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8537101-8539100 Glycine max
Glyma.07G091400 2.0kb downstream 2.0kb downstream 9901 true Chr07: 8539101-8549001 Glycine max
Glyma.07G091400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8547002-8549001 Glycine max
Glyma.07G091400 5.0kb upstream 5.0kb upstream 12901 true Chr07: 8534101-8547001 Glycine max
Glyma.07G091400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8534101-8539100 Glycine max
Glyma.07G091400 5.0kb downstream 5.0kb downstream 12901 true Chr07: 8539101-8552001 Glycine max
Glyma.07G091400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8547002-8552001 Glycine max
Glyma.07G091400 10.0kb upstream 10.0kb upstream 17901 true Chr07: 8529101-8547001 Glycine max
Glyma.07G091400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8529101-8539100 Glycine max
Glyma.07G091400 10.0kb downstream 10.0kb downstream 17901 true Chr07: 8539101-8557001 Glycine max
Glyma.07G091400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8547002-8557001 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254320 5265 Fabidae View MSA
124061495 5270 Rosid View MSA
123743712 5271 Pentapetalae View MSA
122787534 5272 Eudicot View MSA
122046214 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351074 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.6513 0.0 314.499 High High
cufflinks 4.89211 0.0 19.3696    
cufflinks 0.189335 0.0 0.951035 Low  
cufflinks 6.66522 0.0 21.4332    
cufflinks 0.0644883 0.0 0.258836 Low  
cufflinks 0.0599461 0.0 0.242005 Low  
cufflinks 0.065604 0.0 0.264264 Low  
cufflinks 0.705115 0.0 4.02868    
cufflinks 0.0854546 0.0 0.339826 Low  
cufflinks 0.151        
cufflinks 0.002     Low Low
cufflinks 0.402        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 11.681     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.16        
cufflinks 1.051        
cufflinks 11.682     High High
cufflinks 0.001     Low Low
cufflinks 14.577     High High
cufflinks 5.373        
cufflinks 0.001     Low Low
cufflinks 15.752     High High
cufflinks 0.001     Low Low

0 Strain