Gene : PhHAL.5G066900 P. hallii HAL v2.1
Defline:  (1 of 1) KOG1048//KOG2177 - Neural adherens junction protein Plakophilin and related Armadillo repeat proteins // Predicted E3 ubiquitin ligase Genomic Order:  648
Name:  ? PhHAL.5G066900 Secondary Identifier:  ? PAC:40427001
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-7511 Panicum hallii HAL pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G066900 0.5kb upstream 0.5kb upstream 5080 true Chr05: 3631887-3636966 Panicum hallii HAL
PhHAL.5G066900 0.5kb upstream 0.5kb upstream 500 false Chr05: 3636467-3636966 Panicum hallii HAL
PhHAL.5G066900 0.5kb downstream 0.5kb downstream 5080 true Chr05: 3631387-3636466 Panicum hallii HAL
PhHAL.5G066900 0.5kb downstream 0.5kb downstream 500 false Chr05: 3631387-3631886 Panicum hallii HAL
PhHAL.5G066900 1.0kb upstream 1.0kb upstream 5580 true Chr05: 3631887-3637466 Panicum hallii HAL
PhHAL.5G066900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3636467-3637466 Panicum hallii HAL
PhHAL.5G066900 1.0kb downstream 1.0kb downstream 5580 true Chr05: 3630887-3636466 Panicum hallii HAL
PhHAL.5G066900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3630887-3631886 Panicum hallii HAL
PhHAL.5G066900 2.0kb upstream 2.0kb upstream 6580 true Chr05: 3631887-3638466 Panicum hallii HAL
PhHAL.5G066900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3636467-3638466 Panicum hallii HAL
PhHAL.5G066900 2.0kb downstream 2.0kb downstream 6580 true Chr05: 3629887-3636466 Panicum hallii HAL
PhHAL.5G066900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3629887-3631886 Panicum hallii HAL
PhHAL.5G066900 5.0kb upstream 5.0kb upstream 9580 true Chr05: 3631887-3641466 Panicum hallii HAL
PhHAL.5G066900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3636467-3641466 Panicum hallii HAL
PhHAL.5G066900 5.0kb downstream 5.0kb downstream 9580 true Chr05: 3626887-3636466 Panicum hallii HAL
PhHAL.5G066900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3626887-3631886 Panicum hallii HAL
PhHAL.5G066900 10.0kb upstream 10.0kb upstream 14580 true Chr05: 3631887-3646466 Panicum hallii HAL
PhHAL.5G066900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3636467-3646466 Panicum hallii HAL
PhHAL.5G066900 10.0kb downstream 10.0kb downstream 14580 true Chr05: 3621887-3636466 Panicum hallii HAL
PhHAL.5G066900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3621887-3631886 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176885 5267 Panicoideae View MSA
124572302 5269 Grass View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier