Gene : Glyma.07G096900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33428:SF2 - CHLOROPHYLLASE-1 Genomic Order:  969
Name:  ? Glyma.07G096900 Secondary Identifier:  ? PAC:30494051
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5098 Glycine max pathologic  
Gmax PWY-6927 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G096900 0.5kb upstream 0.5kb upstream 2503 true Chr07: 9083837-9086339 Glycine max
Glyma.07G096900 0.5kb upstream 0.5kb upstream 500 false Chr07: 9085840-9086339 Glycine max
Glyma.07G096900 0.5kb downstream 0.5kb downstream 2503 true Chr07: 9083337-9085839 Glycine max
Glyma.07G096900 0.5kb downstream 0.5kb downstream 500 false Chr07: 9083337-9083836 Glycine max
Glyma.07G096900 1.0kb upstream 1.0kb upstream 3003 true Chr07: 9083837-9086839 Glycine max
Glyma.07G096900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9085840-9086839 Glycine max
Glyma.07G096900 1.0kb downstream 1.0kb downstream 3003 true Chr07: 9082837-9085839 Glycine max
Glyma.07G096900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9082837-9083836 Glycine max
Glyma.07G096900 2.0kb upstream 2.0kb upstream 4003 true Chr07: 9083837-9087839 Glycine max
Glyma.07G096900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9085840-9087839 Glycine max
Glyma.07G096900 2.0kb downstream 2.0kb downstream 4003 true Chr07: 9081837-9085839 Glycine max
Glyma.07G096900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9081837-9083836 Glycine max
Glyma.07G096900 5.0kb upstream 5.0kb upstream 7003 true Chr07: 9083837-9090839 Glycine max
Glyma.07G096900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9085840-9090839 Glycine max
Glyma.07G096900 5.0kb downstream 5.0kb downstream 7003 true Chr07: 9078837-9085839 Glycine max
Glyma.07G096900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9078837-9083836 Glycine max
Glyma.07G096900 10.0kb upstream 10.0kb upstream 12003 true Chr07: 9083837-9095839 Glycine max
Glyma.07G096900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9085840-9095839 Glycine max
Glyma.07G096900 10.0kb downstream 10.0kb downstream 12003 true Chr07: 9073837-9085839 Glycine max
Glyma.07G096900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9073837-9083836 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026648 5273 Angiosperm View MSA
122312709 5265 Fabidae View MSA
124064718 5270 Rosid View MSA
123753508 5271 Pentapetalae View MSA
122795782 5272 Eudicot View MSA
121296450 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.29996 0.0 18.7247   High
cufflinks 1.02847 0.0 3.73944   High
cufflinks 0.127648 0.0 0.508181 Low  
cufflinks 0.0100744 0.0 0.048438 Low Low
cufflinks 0.0159675 0.0 0.0733575 Low  
cufflinks 0.0693323 0.0 0.283467 Low  
cufflinks 0.130982 0.0 0.521359 Low  
cufflinks 0.222003 0.0 0.866822 Low  
cufflinks 0.0186161 0.0 0.0842005 Low  
cufflinks 4.098        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.692     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.185       Low
cufflinks 3.177        
cufflinks 15.657     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 17.568     High  
cufflinks 35.074     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 13.927     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain