Gene : PhHAL.5G085900 P. hallii HAL v2.1

Defline:  (1 of 1) K14306 - nuclear pore complex protein Nup62 (NUP62, NSP1) Genomic Order:  835
Name:  ? PhHAL.5G085900 Secondary Identifier:  ? PAC:40427090

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G085900 0.5kb upstream 0.5kb upstream 6662 true Chr05: 4772735-4779396 Panicum hallii HAL
PhHAL.5G085900 0.5kb upstream 0.5kb upstream 500 false Chr05: 4772735-4773234 Panicum hallii HAL
PhHAL.5G085900 0.5kb downstream 0.5kb downstream 6662 true Chr05: 4773235-4779896 Panicum hallii HAL
PhHAL.5G085900 0.5kb downstream 0.5kb downstream 500 false Chr05: 4779397-4779896 Panicum hallii HAL
PhHAL.5G085900 1.0kb upstream 1.0kb upstream 7162 true Chr05: 4772235-4779396 Panicum hallii HAL
PhHAL.5G085900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4772235-4773234 Panicum hallii HAL
PhHAL.5G085900 1.0kb downstream 1.0kb downstream 7162 true Chr05: 4773235-4780396 Panicum hallii HAL
PhHAL.5G085900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4779397-4780396 Panicum hallii HAL
PhHAL.5G085900 2.0kb upstream 2.0kb upstream 8162 true Chr05: 4771235-4779396 Panicum hallii HAL
PhHAL.5G085900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4771235-4773234 Panicum hallii HAL
PhHAL.5G085900 2.0kb downstream 2.0kb downstream 8162 true Chr05: 4773235-4781396 Panicum hallii HAL
PhHAL.5G085900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4779397-4781396 Panicum hallii HAL
PhHAL.5G085900 5.0kb upstream 5.0kb upstream 11162 true Chr05: 4768235-4779396 Panicum hallii HAL
PhHAL.5G085900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4768235-4773234 Panicum hallii HAL
PhHAL.5G085900 5.0kb downstream 5.0kb downstream 11162 true Chr05: 4773235-4784396 Panicum hallii HAL
PhHAL.5G085900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4779397-4784396 Panicum hallii HAL
PhHAL.5G085900 10.0kb upstream 10.0kb upstream 16162 true Chr05: 4763235-4779396 Panicum hallii HAL
PhHAL.5G085900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4763235-4773234 Panicum hallii HAL
PhHAL.5G085900 10.0kb downstream 10.0kb downstream 16162 true Chr05: 4773235-4789396 Panicum hallii HAL
PhHAL.5G085900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4779397-4789396 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176698 5267 Panicoideae View MSA
124582185 5269 Grass View MSA
122044271 5273 Angiosperm View MSA
121348594 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier