Gene : Glyma.07G085000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Genomic Order:  850
Name:  ? Glyma.07G085000 Secondary Identifier:  ? PAC:30495558
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G085000 0.5kb upstream 0.5kb upstream 5383 true Chr07: 7827734-7833116 Glycine max
Glyma.07G085000 0.5kb upstream 0.5kb upstream 500 false Chr07: 7827734-7828233 Glycine max
Glyma.07G085000 0.5kb downstream 0.5kb downstream 5383 true Chr07: 7828234-7833616 Glycine max
Glyma.07G085000 0.5kb downstream 0.5kb downstream 500 false Chr07: 7833117-7833616 Glycine max
Glyma.07G085000 1.0kb upstream 1.0kb upstream 5883 true Chr07: 7827234-7833116 Glycine max
Glyma.07G085000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7827234-7828233 Glycine max
Glyma.07G085000 1.0kb downstream 1.0kb downstream 5883 true Chr07: 7828234-7834116 Glycine max
Glyma.07G085000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7833117-7834116 Glycine max
Glyma.07G085000 2.0kb upstream 2.0kb upstream 6883 true Chr07: 7826234-7833116 Glycine max
Glyma.07G085000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7826234-7828233 Glycine max
Glyma.07G085000 2.0kb downstream 2.0kb downstream 6883 true Chr07: 7828234-7835116 Glycine max
Glyma.07G085000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7833117-7835116 Glycine max
Glyma.07G085000 5.0kb upstream 5.0kb upstream 9883 true Chr07: 7823234-7833116 Glycine max
Glyma.07G085000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7823234-7828233 Glycine max
Glyma.07G085000 5.0kb downstream 5.0kb downstream 9883 true Chr07: 7828234-7838116 Glycine max
Glyma.07G085000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7833117-7838116 Glycine max
Glyma.07G085000 10.0kb upstream 10.0kb upstream 14883 true Chr07: 7818234-7833116 Glycine max
Glyma.07G085000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7818234-7828233 Glycine max
Glyma.07G085000 10.0kb downstream 10.0kb downstream 14883 true Chr07: 7828234-7843116 Glycine max
Glyma.07G085000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7833117-7843116 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308343 5265 Fabidae View MSA
124069461 5270 Rosid View MSA
123751413 5271 Pentapetalae View MSA
122794787 5272 Eudicot View MSA
122041932 5273 Angiosperm View MSA
121309904 5274 Embryophyte View MSA
123347537 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00623257 0.0 0.203241 Low  
cufflinks 0.177086 0.0 1.46712 Low  
cufflinks 2.73007 0.0 8.89396   High
cufflinks 0.0817823 0.0 0.593015 Low  
cufflinks 0.0053732 0.0 0.0918792 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.53048 0.0 6.29155   High
cufflinks 0.0166532 0.0 0.317573 Low  
cufflinks 0.0123172 0.0 0.145685 Low  
cufflinks 0.03     Low  
cufflinks 0.004     Low Low
cufflinks 0.586        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.392        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.905       High
cufflinks 0.312        
cufflinks 0.165        
cufflinks 0.009     Low Low
cufflinks 0.197        
cufflinks 0.151        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.235        
cufflinks 0.003     Low Low

0 Strain