Gene : Glyma.07G085300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Genomic Order:  853
Name:  ? Glyma.07G085300 Secondary Identifier:  ? PAC:30495445
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G085300 0.5kb upstream 0.5kb upstream 9689 true Chr07: 7855189-7864877 Glycine max
Glyma.07G085300 0.5kb upstream 0.5kb upstream 500 false Chr07: 7864378-7864877 Glycine max
Glyma.07G085300 0.5kb downstream 0.5kb downstream 9689 true Chr07: 7854689-7864377 Glycine max
Glyma.07G085300 0.5kb downstream 0.5kb downstream 500 false Chr07: 7854689-7855188 Glycine max
Glyma.07G085300 1.0kb upstream 1.0kb upstream 10189 true Chr07: 7855189-7865377 Glycine max
Glyma.07G085300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7864378-7865377 Glycine max
Glyma.07G085300 1.0kb downstream 1.0kb downstream 10189 true Chr07: 7854189-7864377 Glycine max
Glyma.07G085300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7854189-7855188 Glycine max
Glyma.07G085300 2.0kb upstream 2.0kb upstream 11189 true Chr07: 7855189-7866377 Glycine max
Glyma.07G085300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7864378-7866377 Glycine max
Glyma.07G085300 2.0kb downstream 2.0kb downstream 11189 true Chr07: 7853189-7864377 Glycine max
Glyma.07G085300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7853189-7855188 Glycine max
Glyma.07G085300 5.0kb upstream 5.0kb upstream 14189 true Chr07: 7855189-7869377 Glycine max
Glyma.07G085300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7864378-7869377 Glycine max
Glyma.07G085300 5.0kb downstream 5.0kb downstream 14189 true Chr07: 7850189-7864377 Glycine max
Glyma.07G085300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7850189-7855188 Glycine max
Glyma.07G085300 10.0kb upstream 10.0kb upstream 19189 true Chr07: 7855189-7874377 Glycine max
Glyma.07G085300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7864378-7874377 Glycine max
Glyma.07G085300 10.0kb downstream 10.0kb downstream 19189 true Chr07: 7845189-7864377 Glycine max
Glyma.07G085300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7845189-7855188 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307054 5265 Fabidae View MSA
124069206 5270 Rosid View MSA
123746618 5271 Pentapetalae View MSA
122795390 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.42725 0.0 8.81512    
cufflinks 1.06958 0.0 5.50686    
cufflinks 2.09498 0.0 10.2239   High
cufflinks 0.971812 0.0 5.11328    
cufflinks 0.985034 0.0 6.31243    
cufflinks 1.33335 0.0 6.42983    
cufflinks 1.72411 0.0 5.85618   High
cufflinks 0.580392 0.0 2.53966   Low
cufflinks 0.921824 0.0 3.66166    
cufflinks 0.043     Low Low
cufflinks 0.107        
cufflinks 0.09     Low  
cufflinks 0.045     Low Low
cufflinks 0.072     Low  
cufflinks 0.063        
cufflinks 0.072     Low  
cufflinks 0.051     Low  
cufflinks 0.054     Low  
cufflinks 0.086     Low  
cufflinks 0.071     Low  
cufflinks 0.096        
cufflinks 0.08     Low  
cufflinks 0.117       High
cufflinks 0.214       High
cufflinks 0.069     Low  
cufflinks 0.043     Low Low

0 Strain