Gene : PhHAL.5G370200 P. hallii HAL v2.1
Defline:  (1 of 3) 1.1.1.25//4.2.1.10 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase // 3-dehydroquinate dehydratase Genomic Order:  3166
Name:  ? PhHAL.5G370200 Secondary Identifier:  ? PAC:40425941
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL ARO-PWY Panicum hallii HAL pathologic  
PhalliiHAL PWY-6163 Panicum hallii HAL pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G370200 0.5kb upstream 0.5kb upstream 13632 true Chr05: 43625233-43638864 Panicum hallii HAL
PhHAL.5G370200 0.5kb upstream 0.5kb upstream 500 false Chr05: 43638365-43638864 Panicum hallii HAL
PhHAL.5G370200 0.5kb downstream 0.5kb downstream 13632 true Chr05: 43624733-43638364 Panicum hallii HAL
PhHAL.5G370200 0.5kb downstream 0.5kb downstream 500 false Chr05: 43624733-43625232 Panicum hallii HAL
PhHAL.5G370200 1.0kb upstream 1.0kb upstream 14132 true Chr05: 43625233-43639364 Panicum hallii HAL
PhHAL.5G370200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 43638365-43639364 Panicum hallii HAL
PhHAL.5G370200 1.0kb downstream 1.0kb downstream 14132 true Chr05: 43624233-43638364 Panicum hallii HAL
PhHAL.5G370200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 43624233-43625232 Panicum hallii HAL
PhHAL.5G370200 2.0kb upstream 2.0kb upstream 15132 true Chr05: 43625233-43640364 Panicum hallii HAL
PhHAL.5G370200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 43638365-43640364 Panicum hallii HAL
PhHAL.5G370200 2.0kb downstream 2.0kb downstream 15132 true Chr05: 43623233-43638364 Panicum hallii HAL
PhHAL.5G370200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 43623233-43625232 Panicum hallii HAL
PhHAL.5G370200 5.0kb upstream 5.0kb upstream 18132 true Chr05: 43625233-43643364 Panicum hallii HAL
PhHAL.5G370200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 43638365-43643364 Panicum hallii HAL
PhHAL.5G370200 5.0kb downstream 5.0kb downstream 18132 true Chr05: 43620233-43638364 Panicum hallii HAL
PhHAL.5G370200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 43620233-43625232 Panicum hallii HAL
PhHAL.5G370200 10.0kb upstream 10.0kb upstream 23132 true Chr05: 43625233-43648364 Panicum hallii HAL
PhHAL.5G370200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 43638365-43648364 Panicum hallii HAL
PhHAL.5G370200 10.0kb downstream 10.0kb downstream 23132 true Chr05: 43615233-43638364 Panicum hallii HAL
PhHAL.5G370200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 43615233-43625232 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189124 5267 Panicoideae View MSA
124570353 5269 Grass View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier