Gene : Glyma.07G088300 G. max Wm82.a2.v1
Defline:  (1 of 458) PF00560 - Leucine Rich Repeat (LRR_1) Genomic Order:  883
Name:  ? Glyma.07G088300 Secondary Identifier:  ? PAC:30494785
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G088300 0.5kb upstream 0.5kb upstream 2809 true Chr07: 8225678-8228486 Glycine max
Glyma.07G088300 0.5kb upstream 0.5kb upstream 500 false Chr07: 8225678-8226177 Glycine max
Glyma.07G088300 0.5kb downstream 0.5kb downstream 2809 true Chr07: 8226178-8228986 Glycine max
Glyma.07G088300 0.5kb downstream 0.5kb downstream 500 false Chr07: 8228487-8228986 Glycine max
Glyma.07G088300 1.0kb upstream 1.0kb upstream 3309 true Chr07: 8225178-8228486 Glycine max
Glyma.07G088300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8225178-8226177 Glycine max
Glyma.07G088300 1.0kb downstream 1.0kb downstream 3309 true Chr07: 8226178-8229486 Glycine max
Glyma.07G088300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8228487-8229486 Glycine max
Glyma.07G088300 2.0kb upstream 2.0kb upstream 4309 true Chr07: 8224178-8228486 Glycine max
Glyma.07G088300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8224178-8226177 Glycine max
Glyma.07G088300 2.0kb downstream 2.0kb downstream 4309 true Chr07: 8226178-8230486 Glycine max
Glyma.07G088300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8228487-8230486 Glycine max
Glyma.07G088300 5.0kb upstream 5.0kb upstream 7309 true Chr07: 8221178-8228486 Glycine max
Glyma.07G088300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8221178-8226177 Glycine max
Glyma.07G088300 5.0kb downstream 5.0kb downstream 7309 true Chr07: 8226178-8233486 Glycine max
Glyma.07G088300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8228487-8233486 Glycine max
Glyma.07G088300 10.0kb upstream 10.0kb upstream 12309 true Chr07: 8216178-8228486 Glycine max
Glyma.07G088300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8216178-8226177 Glycine max
Glyma.07G088300 10.0kb downstream 10.0kb downstream 12309 true Chr07: 8226178-8238486 Glycine max
Glyma.07G088300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8228487-8238486 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310257 5265 Fabidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1102 0.0 30.2937   Low
cufflinks 16.5036 0.0 44.2198    
cufflinks 11.5762 0.0 31.6932    
cufflinks 41.2206 0.0 112.175 High  
cufflinks 35.73 0.0 96.9071 High  
cufflinks 122.386 0.0 385.17 High High
cufflinks 12.6587 0.0 34.2327    
cufflinks 36.8445 0.0 99.7859 High  
cufflinks 20.7639 0.0 55.3969 High  
cufflinks 77.638     High High
cufflinks 12.325     High Low
cufflinks 22.041     High  
cufflinks 33.497     High  
cufflinks 17.662     High  
cufflinks 49.492     High High
cufflinks 25.661     High  
cufflinks 48.904     High High
cufflinks 31.781     High  
cufflinks 16.094     High  
cufflinks 20.113     High  
cufflinks 12.109     High Low
cufflinks 21.151     High  
cufflinks 25.5     High  
cufflinks 7.902     High Low
cufflinks 20.607     High  
cufflinks 24.461     High  

0 Strain