Gene : PhHAL.5G400300 P. hallii HAL v2.1
Defline:  (1 of 1) PTHR11735//PTHR11735:SF12 - O-SIALOGLYCOPROTEIN ENDOPEPTIDASE // TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED Genomic Order:  3364
Name:  ? PhHAL.5G400300 Secondary Identifier:  ? PAC:40428966
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY0-1587 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G400300 0.5kb upstream 0.5kb upstream 6987 true Chr05: 49603415-49610401 Panicum hallii HAL
PhHAL.5G400300 0.5kb upstream 0.5kb upstream 500 false Chr05: 49603415-49603914 Panicum hallii HAL
PhHAL.5G400300 0.5kb downstream 0.5kb downstream 6987 true Chr05: 49603915-49610901 Panicum hallii HAL
PhHAL.5G400300 0.5kb downstream 0.5kb downstream 500 false Chr05: 49610402-49610901 Panicum hallii HAL
PhHAL.5G400300 1.0kb upstream 1.0kb upstream 7487 true Chr05: 49602915-49610401 Panicum hallii HAL
PhHAL.5G400300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 49602915-49603914 Panicum hallii HAL
PhHAL.5G400300 1.0kb downstream 1.0kb downstream 7487 true Chr05: 49603915-49611401 Panicum hallii HAL
PhHAL.5G400300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 49610402-49611401 Panicum hallii HAL
PhHAL.5G400300 2.0kb upstream 2.0kb upstream 8487 true Chr05: 49601915-49610401 Panicum hallii HAL
PhHAL.5G400300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 49601915-49603914 Panicum hallii HAL
PhHAL.5G400300 2.0kb downstream 2.0kb downstream 8487 true Chr05: 49603915-49612401 Panicum hallii HAL
PhHAL.5G400300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 49610402-49612401 Panicum hallii HAL
PhHAL.5G400300 5.0kb upstream 5.0kb upstream 11487 true Chr05: 49598915-49610401 Panicum hallii HAL
PhHAL.5G400300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 49598915-49603914 Panicum hallii HAL
PhHAL.5G400300 5.0kb downstream 5.0kb downstream 11487 true Chr05: 49603915-49615401 Panicum hallii HAL
PhHAL.5G400300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 49610402-49615401 Panicum hallii HAL
PhHAL.5G400300 10.0kb upstream 10.0kb upstream 16487 true Chr05: 49593915-49610401 Panicum hallii HAL
PhHAL.5G400300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 49593915-49603914 Panicum hallii HAL
PhHAL.5G400300 10.0kb downstream 10.0kb downstream 16487 true Chr05: 49603915-49620401 Panicum hallii HAL
PhHAL.5G400300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 49610402-49620401 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195272 5267 Panicoideae View MSA
124572506 5269 Grass View MSA
122043416 5273 Angiosperm View MSA
121345797 5274 Embryophyte View MSA
123425080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier