Gene : PhHAL.5G393800 P. hallii HAL v2.1

Defline:  (1 of 2) 2.7.6.3 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase Genomic Order:  3303
Name:  ? PhHAL.5G393800 Secondary Identifier:  ? PAC:40428238

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-6147 Panicum hallii HAL pathologic  
PhalliiHAL PWY-6612 Panicum hallii HAL pathologic  
PhalliiHAL PWY-6614 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G393800 0.5kb upstream 0.5kb upstream 4414 true Chr05: 48773597-48778010 Panicum hallii HAL
PhHAL.5G393800 0.5kb upstream 0.5kb upstream 500 false Chr05: 48773597-48774096 Panicum hallii HAL
PhHAL.5G393800 0.5kb downstream 0.5kb downstream 4414 true Chr05: 48774097-48778510 Panicum hallii HAL
PhHAL.5G393800 0.5kb downstream 0.5kb downstream 500 false Chr05: 48778011-48778510 Panicum hallii HAL
PhHAL.5G393800 1.0kb upstream 1.0kb upstream 4914 true Chr05: 48773097-48778010 Panicum hallii HAL
PhHAL.5G393800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 48773097-48774096 Panicum hallii HAL
PhHAL.5G393800 1.0kb downstream 1.0kb downstream 4914 true Chr05: 48774097-48779010 Panicum hallii HAL
PhHAL.5G393800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 48778011-48779010 Panicum hallii HAL
PhHAL.5G393800 2.0kb upstream 2.0kb upstream 5914 true Chr05: 48772097-48778010 Panicum hallii HAL
PhHAL.5G393800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 48772097-48774096 Panicum hallii HAL
PhHAL.5G393800 2.0kb downstream 2.0kb downstream 5914 true Chr05: 48774097-48780010 Panicum hallii HAL
PhHAL.5G393800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 48778011-48780010 Panicum hallii HAL
PhHAL.5G393800 5.0kb upstream 5.0kb upstream 8914 true Chr05: 48769097-48778010 Panicum hallii HAL
PhHAL.5G393800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 48769097-48774096 Panicum hallii HAL
PhHAL.5G393800 5.0kb downstream 5.0kb downstream 8914 true Chr05: 48774097-48783010 Panicum hallii HAL
PhHAL.5G393800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 48778011-48783010 Panicum hallii HAL
PhHAL.5G393800 10.0kb upstream 10.0kb upstream 13914 true Chr05: 48764097-48778010 Panicum hallii HAL
PhHAL.5G393800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 48764097-48774096 Panicum hallii HAL
PhHAL.5G393800 10.0kb downstream 10.0kb downstream 13914 true Chr05: 48774097-48788010 Panicum hallii HAL
PhHAL.5G393800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 48778011-48788010 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194312 5267 Panicoideae View MSA
124573700 5269 Grass View MSA
122044899 5273 Angiosperm View MSA
121345768 5274 Embryophyte View MSA
123427891 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier