Gene : Glyma.07G144400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10556:SF37 - 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 2 Genomic Order:  1444
Name:  ? Glyma.07G144400 Secondary Identifier:  ? PAC:30494079
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G144400 0.5kb upstream 0.5kb upstream 1292 true Chr07: 17209390-17210681 Glycine max
Glyma.07G144400 0.5kb upstream 0.5kb upstream 500 false Chr07: 17210182-17210681 Glycine max
Glyma.07G144400 0.5kb downstream 0.5kb downstream 1292 true Chr07: 17208890-17210181 Glycine max
Glyma.07G144400 0.5kb downstream 0.5kb downstream 500 false Chr07: 17208890-17209389 Glycine max
Glyma.07G144400 1.0kb upstream 1.0kb upstream 1792 true Chr07: 17209390-17211181 Glycine max
Glyma.07G144400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17210182-17211181 Glycine max
Glyma.07G144400 1.0kb downstream 1.0kb downstream 1792 true Chr07: 17208390-17210181 Glycine max
Glyma.07G144400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17208390-17209389 Glycine max
Glyma.07G144400 2.0kb upstream 2.0kb upstream 2792 true Chr07: 17209390-17212181 Glycine max
Glyma.07G144400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17210182-17212181 Glycine max
Glyma.07G144400 2.0kb downstream 2.0kb downstream 2792 true Chr07: 17207390-17210181 Glycine max
Glyma.07G144400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17207390-17209389 Glycine max
Glyma.07G144400 5.0kb upstream 5.0kb upstream 5792 true Chr07: 17209390-17215181 Glycine max
Glyma.07G144400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17210182-17215181 Glycine max
Glyma.07G144400 5.0kb downstream 5.0kb downstream 5792 true Chr07: 17204390-17210181 Glycine max
Glyma.07G144400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17204390-17209389 Glycine max
Glyma.07G144400 10.0kb upstream 10.0kb upstream 10792 true Chr07: 17209390-17220181 Glycine max
Glyma.07G144400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17210182-17220181 Glycine max
Glyma.07G144400 10.0kb downstream 10.0kb downstream 10792 true Chr07: 17199390-17210181 Glycine max
Glyma.07G144400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17199390-17209389 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308921 5265 Fabidae View MSA
124064242 5270 Rosid View MSA
123736614 5271 Pentapetalae View MSA
122785664 5272 Eudicot View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.31553 0.0 11.6843    
cufflinks 8.64198 0.0 27.2785   High
cufflinks 2.90512 0.0 10.3919   Low
cufflinks 6.74842 0.0 21.9909    
cufflinks 5.06296 0.0 16.9911    
cufflinks 3.09089 0.0 10.9329   Low
cufflinks 5.70872 0.0 18.8655    
cufflinks 6.13307 0.0 20.1867    
cufflinks 4.62747 0.0 15.7607    
cufflinks 4.14       High
cufflinks 0.22       Low
cufflinks 2.821        
cufflinks 3.508        
cufflinks 2.695        
cufflinks 0.581        
cufflinks 2.345        
cufflinks 0.512        
cufflinks 2.094        
cufflinks 6.64       High
cufflinks 2.218        
cufflinks 0.341       Low
cufflinks 2.333        
cufflinks 3.054        
cufflinks 0.334       Low
cufflinks 1.938        
cufflinks 0.294       Low

0 Strain