Gene : Glyma.07G130400 G. max Wm82.a2.v1
Defline:  (1 of 36) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  1304
Name:  ? Glyma.07G130400 Secondary Identifier:  ? PAC:30494233
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G130400 0.5kb upstream 0.5kb upstream 6285 true Chr07: 15465420-15471704 Glycine max
Glyma.07G130400 0.5kb upstream 0.5kb upstream 500 false Chr07: 15465420-15465919 Glycine max
Glyma.07G130400 0.5kb downstream 0.5kb downstream 6285 true Chr07: 15465920-15472204 Glycine max
Glyma.07G130400 0.5kb downstream 0.5kb downstream 500 false Chr07: 15471705-15472204 Glycine max
Glyma.07G130400 1.0kb upstream 1.0kb upstream 6785 true Chr07: 15464920-15471704 Glycine max
Glyma.07G130400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15464920-15465919 Glycine max
Glyma.07G130400 1.0kb downstream 1.0kb downstream 6785 true Chr07: 15465920-15472704 Glycine max
Glyma.07G130400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15471705-15472704 Glycine max
Glyma.07G130400 2.0kb upstream 2.0kb upstream 7785 true Chr07: 15463920-15471704 Glycine max
Glyma.07G130400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15463920-15465919 Glycine max
Glyma.07G130400 2.0kb downstream 2.0kb downstream 7785 true Chr07: 15465920-15473704 Glycine max
Glyma.07G130400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15471705-15473704 Glycine max
Glyma.07G130400 5.0kb upstream 5.0kb upstream 10785 true Chr07: 15460920-15471704 Glycine max
Glyma.07G130400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15460920-15465919 Glycine max
Glyma.07G130400 5.0kb downstream 5.0kb downstream 10785 true Chr07: 15465920-15476704 Glycine max
Glyma.07G130400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15471705-15476704 Glycine max
Glyma.07G130400 10.0kb upstream 10.0kb upstream 15785 true Chr07: 15455920-15471704 Glycine max
Glyma.07G130400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15455920-15465919 Glycine max
Glyma.07G130400 10.0kb downstream 10.0kb downstream 15785 true Chr07: 15465920-15481704 Glycine max
Glyma.07G130400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15471705-15481704 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309356 5265 Fabidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.099 0.0 58.1006    
cufflinks 11.2942 0.0 43.1506    
cufflinks 11.3762 0.0 43.5574    
cufflinks 14.5765 0.0 57.6353    
cufflinks 23.3948 0.0 92.2443 High High
cufflinks 10.1313 0.0 38.446    
cufflinks 8.63841 0.0 32.4597   Low
cufflinks 21.4036 0.0 82.4911 High High
cufflinks 17.9831 0.0 66.4245    
cufflinks 3.911        
cufflinks 3.125        
cufflinks 3.739        
cufflinks 7.152       High
cufflinks 8.077     High High
cufflinks 2.727        
cufflinks 3.066        
cufflinks 2.147       Low
cufflinks 4.691        
cufflinks 4.3        
cufflinks 3.446        
cufflinks 2.998        
cufflinks 3.152        
cufflinks 2.371       Low
cufflinks 1.911       Low
cufflinks 3.647        
cufflinks 4.294        

0 Strain